Analysis of interatomic Contacts of Structural Units in PDB entry:
6UVW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UVW entry

There are 6 chains in PDB entry 6UVW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 9PHE 303
B
 G -1 G 25
C
 C 0 C 26
D
 ARG 7PHE 303
E
 G -1 G 25
F
 C 0 C 26
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6UVW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 22Right-handed alpha
Helix 2
AA2
A
53 65Right-handed alpha
Helix 3
AA3
A
83 85Right-handed 310
Helix 4
AA4
A
86 97Right-handed alpha
Helix 5
AA5
A
102 119Right-handed alpha
Helix 6
AA6
A
120 123Right-handed 310
Helix 7
AA7
A
124 138Right-handed alpha
Helix 8
AA8
A
143 150Right-handed alpha
Helix 9
AA9
A
167 178Right-handed alpha
Helix 10
AB1
A
208 220Right-handed alpha
Helix 11
AB2
A
241 248Right-handed alpha
Helix 12
AB3
A
248 256Right-handed alpha
Helix 13
AB4
A
260 278Right-handed alpha
Helix 14
AB5
A
279 282Right-handed 310
Helix 15
AB6
A
283 297Right-handed alpha
Helix 16
AB7
A
298 301Right-handed 310
Helix 17
AB8
D
11 22Right-handed alpha
Helix 18
AB9
D
53 65Right-handed alpha
Helix 19
AC1
D
83 85Right-handed 310
Helix 20
AC2
D
86 97Right-handed alpha
Helix 21
AC3
D
102 119Right-handed alpha
Helix 22
AC4
D
120 123Right-handed 310
Helix 23
AC5
D
124 138Right-handed alpha
Helix 24
AC6
D
143 150Right-handed alpha
Helix 25
AC7
D
167 178Right-handed alpha
Helix 26
AC8
D
208 220Right-handed alpha
Helix 27
AC9
D
241 248Right-handed alpha
Helix 28
AD1
D
248 256Right-handed alpha
Helix 29
AD2
D
260 278Right-handed alpha
Helix 30
AD3
D
279 282Right-handed 310
Helix 31
AD4
D
283 296Right-handed alpha
Helix 32
AD5
D
297 301Right-handed 310
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There are 4 sheets in PDB entry 6UVW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 31first strand
Strand 2
A
39 50anti-parallel
Strand 3
A
76 81anti-parallel
Strand 4
A
68 71anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 187first strand
Strand 2
A
194 205anti-parallel
Strand 3
A
232 239anti-parallel
Strand 4
A
223 229anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
23 31first strand
Strand 2
D
39 50anti-parallel
Strand 3
D
76 81anti-parallel
Strand 4
D
68 71anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
180 187first strand
Strand 2
D
194 205anti-parallel
Strand 3
D
232 239anti-parallel
Strand 4
D
223 229anti-parallel
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