Analysis of interatomic Contacts of Structural Units in PDB entry:
6UW2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UW2 entry

There are 6 chains in PDB entry 6UW2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 40	HIS 488
B	GLY 41	HIS 487
C	GLY 41	LYS 486
D	GLY 41	HIS 487
E	GLY 41	HIS 488
F	LYS 40	HIS 487

There are133 helices in PDB entry 6UW2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	63	76	Right-handed alpha
Helix 2	AA2	A	93	103	Right-handed alpha
Helix 3	AA3	A	116	122	Right-handed alpha
Helix 4	AA4	A	125	129	Right-handed 310
Helix 5	AA5	A	130	145	Right-handed alpha
Helix 6	AA6	A	146	152	Right-handed alpha
Helix 7	AA7	A	153	167	Right-handed alpha
Helix 8	AA8	A	176	194	Right-handed alpha
Helix 9	AA9	A	194	200	Right-handed alpha
Helix 10	AB1	A	201	215	Right-handed alpha
Helix 11	AB2	A	217	223	Right-handed alpha
Helix 12	AB3	A	228	255	Right-handed alpha
Helix 13	AB4	A	262	269	Right-handed alpha
Helix 14	AB5	A	280	298	Right-handed alpha
Helix 15	AB6	A	298	311	Right-handed alpha
Helix 16	AB7	A	312	335	Right-handed alpha
Helix 17	AB8	A	339	345	Right-handed alpha
Helix 18	AB9	A	346	360	Right-handed alpha
Helix 19	AC1	A	390	395	Right-handed alpha
Helix 20	AC2	A	408	410	Right-handed 310
Helix 21	AC3	A	411	416	Right-handed alpha
Helix 22	AC4	A	429	433	Right-handed 310
Helix 23	AC5	A	436	454	Right-handed alpha
Helix 24	AC6	B	56	61	Right-handed alpha
Helix 25	AC7	B	63	76	Right-handed alpha
Helix 26	AC8	B	93	103	Right-handed alpha
Helix 27	AC9	B	117	122	Right-handed alpha
Helix 28	AD1	B	130	145	Right-handed alpha
Helix 29	AD2	B	146	167	Right-handed alpha
Helix 30	AD3	B	176	192	Right-handed alpha
Helix 31	AD4	B	194	201	Right-handed alpha
Helix 32	AD5	B	201	215	Right-handed alpha
Helix 33	AD6	B	217	223	Right-handed alpha
Helix 34	AD7	B	228	255	Right-handed alpha
Helix 35	AD8	B	262	270	Right-handed alpha
Helix 36	AD9	B	280	298	Right-handed alpha
Helix 37	AE1	B	298	312	Right-handed alpha
Helix 38	AE2	B	312	334	Right-handed alpha
Helix 39	AE3	B	339	345	Right-handed alpha
Helix 40	AE4	B	346	360	Right-handed alpha
Helix 41	AE5	B	390	395	Right-handed alpha
Helix 42	AE6	B	408	410	Right-handed 310
Helix 43	AE7	B	411	416	Right-handed alpha
Helix 44	AE8	B	429	433	Right-handed 310
Helix 45	AE9	B	436	455	Right-handed alpha
Helix 46	AF1	C	56	61	Right-handed alpha
Helix 47	AF2	C	63	76	Right-handed alpha
Helix 48	AF3	C	92	103	Right-handed alpha
Helix 49	AF4	C	110	115	Right-handed alpha
Helix 50	AF5	C	116	118	Right-handed 310
Helix 51	AF6	C	125	129	Right-handed 310
Helix 52	AF7	C	130	145	Right-handed alpha
Helix 53	AF8	C	146	167	Right-handed alpha
Helix 54	AF9	C	176	200	Right-handed alpha
Helix 55	AG1	C	201	214	Right-handed alpha
Helix 56	AG2	C	217	223	Right-handed alpha
Helix 57	AG3	C	228	254	Right-handed alpha
Helix 58	AG4	C	262	270	Right-handed alpha
Helix 59	AG5	C	280	298	Right-handed alpha
Helix 60	AG6	C	298	310	Right-handed alpha
Helix 61	AG7	C	312	319	Right-handed alpha
Helix 62	AG8	C	319	325	Right-handed alpha
Helix 63	AG9	C	325	333	Right-handed alpha
Helix 64	AH1	C	339	345	Right-handed alpha
Helix 65	AH2	C	346	360	Right-handed alpha
Helix 66	AH3	C	390	395	Right-handed alpha
Helix 67	AH4	C	410	415	Right-handed alpha
Helix 68	AH5	C	436	454	Right-handed alpha
Helix 69	AH6	D	56	61	Right-handed alpha
Helix 70	AH7	D	63	76	Right-handed alpha
Helix 71	AH8	D	93	102	Right-handed alpha
Helix 72	AH9	D	112	116	Right-handed 310
Helix 73	AI1	D	117	122	Right-handed alpha
Helix 74	AI2	D	125	129	Right-handed 310
Helix 75	AI3	D	130	145	Right-handed alpha
Helix 76	AI4	D	146	167	Right-handed alpha
Helix 77	AI5	D	176	200	Right-handed alpha
Helix 78	AI6	D	201	215	Right-handed alpha
Helix 79	AI7	D	217	223	Right-handed alpha
Helix 80	AI8	D	228	255	Right-handed alpha
Helix 81	AI9	D	262	270	Right-handed alpha
Helix 82	AJ1	D	280	298	Right-handed alpha
Helix 83	AJ2	D	298	311	Right-handed alpha
Helix 84	AJ3	D	312	335	Right-handed alpha
Helix 85	AJ4	D	339	346	Right-handed alpha
Helix 86	AJ5	D	346	360	Right-handed alpha
Helix 87	AJ6	D	390	395	Right-handed alpha
Helix 88	AJ7	D	408	413	Right-handed 310
Helix 89	AJ8	D	436	454	Right-handed alpha
Helix 90	AJ9	E	56	61	Right-handed alpha
Helix 91	AK1	E	63	76	Right-handed alpha
Helix 92	AK2	E	96	103	Right-handed alpha
Helix 93	AK3	E	114	116	Right-handed 310
Helix 94	AK4	E	117	122	Right-handed alpha
Helix 95	AK5	E	125	129	Right-handed 310
Helix 96	AK6	E	130	145	Right-handed alpha
Helix 97	AK7	E	146	167	Right-handed alpha
Helix 98	AK8	E	176	200	Right-handed alpha
Helix 99	AK9	E	201	214	Right-handed alpha
Helix 100	AL1	E	215	217	Right-handed 310
Helix 101	AL2	E	218	223	Right-handed alpha
Helix 102	AL3	E	228	254	Right-handed alpha
Helix 103	AL4	E	262	270	Right-handed alpha
Helix 104	AL5	E	280	298	Right-handed alpha
Helix 105	AL6	E	298	311	Right-handed alpha
Helix 106	AL7	E	312	335	Right-handed alpha
Helix 107	AL8	E	339	344	Right-handed alpha
Helix 108	AL9	E	346	360	Right-handed alpha
Helix 109	AM1	E	390	395	Right-handed alpha
Helix 110	AM2	E	410	415	Right-handed alpha
Helix 111	AM3	E	429	433	Right-handed 310
Helix 112	AM4	E	436	454	Right-handed alpha
Helix 113	AM5	F	56	62	Right-handed alpha
Helix 114	AM6	F	63	76	Right-handed alpha
Helix 115	AM7	F	92	103	Right-handed alpha
Helix 116	AM8	F	112	116	Right-handed 310
Helix 117	AM9	F	117	122	Right-handed alpha
Helix 118	AN1	F	125	129	Right-handed 310
Helix 119	AN2	F	130	145	Right-handed alpha
Helix 120	AN3	F	146	166	Right-handed alpha
Helix 121	AN4	F	176	215	Right-handed alpha
Helix 122	AN5	F	218	223	Right-handed alpha
Helix 123	AN6	F	228	255	Right-handed alpha
Helix 124	AN7	F	262	270	Right-handed alpha
Helix 125	AN8	F	280	298	Right-handed alpha
Helix 126	AN9	F	298	311	Right-handed alpha
Helix 127	AO1	F	312	333	Right-handed alpha
Helix 128	AO2	F	339	344	Right-handed alpha
Helix 129	AO3	F	346	360	Right-handed alpha
Helix 130	AO4	F	392	396	Right-handed 310
Helix 131	AO5	F	408	410	Right-handed 310
Helix 132	AO6	F	411	416	Right-handed alpha
Helix 133	AO7	F	436	454	Right-handed alpha

There are 18 sheets in PDB entry 6UW2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	83	first strand
Strand 2	A	86	91	anti-parallel
Strand 3	A	386	389	parallel
Strand 4	A	366	370	anti-parallel
Strand 5	A	108	109	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	175	first strand
Strand 2	A	480	485	anti-parallel
Strand 3	A	455	459	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	376	first strand
Strand 2	A	379	381	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	82	first strand
Strand 2	B	87	91	anti-parallel
Strand 3	B	386	389	parallel
Strand 4	B	366	370	anti-parallel
Strand 5	B	108	109	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	175	first strand
Strand 2	B	480	484	anti-parallel
Strand 3	B	456	459	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	374	376	first strand
Strand 2	B	379	381	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	47	first strand
Strand 2	C	78	82	parallel
Strand 3	C	87	91	anti-parallel
Strand 4	C	386	389	parallel
Strand 5	C	366	369	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	171	175	first strand
Strand 2	C	480	485	anti-parallel
Strand 3	C	455	458	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	374	376	first strand
Strand 2	C	379	381	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	78	83	first strand
Strand 2	D	86	91	anti-parallel
Strand 3	D	386	389	parallel
Strand 4	D	366	370	anti-parallel
Strand 5	D	108	109	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	171	175	first strand
Strand 2	D	480	485	anti-parallel
Strand 3	D	455	459	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	374	376	first strand
Strand 2	D	379	381	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	47	first strand
Strand 2	E	78	82	parallel
Strand 3	E	87	91	anti-parallel
Strand 4	E	386	389	parallel
Strand 5	E	366	370	anti-parallel
Strand 6	E	108	109	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	171	175	first strand
Strand 2	E	480	485	anti-parallel
Strand 3	E	455	459	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	374	376	first strand
Strand 2	E	379	381	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	78	82	first strand
Strand 2	F	87	91	anti-parallel
Strand 3	F	386	389	parallel
Strand 4	F	366	370	anti-parallel
Strand 5	F	108	109	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	171	175	first strand
Strand 2	F	480	485	anti-parallel
Strand 3	F	455	459	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	374	376	first strand
Strand 2	F	379	381	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UW2

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UW2