Analysis of interatomic Contacts of Structural Units in PDB entry:
6UWW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UWW entry

There is 1 chain in PDB entry 6UWW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 11LEU 173
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6UWW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 46Right-handed alpha
Helix 2
AA2
A
54 60Right-handed alpha
Helix 3
AA3
A
61 65Right-handed 310
Helix 4
AA4
A
91 96Right-handed alpha
Helix 5
AA5
A
110 118Right-handed alpha
Helix 6
AA6
A
119 121Right-handed 310
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There are 3 sheets in PDB entry 6UWW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 89first strand
Strand 2
A
71 75parallel
Strand 3
A
49 53parallel
Strand 4
A
105 107parallel
Strand 5
A
12 19parallel
Strand 6
A
123 130parallel
Strand 7
A
164 172anti-parallel
Strand 8
A
149 153anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 89first strand
Strand 2
A
71 75parallel
Strand 3
A
49 53parallel
Strand 4
A
105 107parallel
Strand 5
A
12 19parallel
Strand 6
A
123 130parallel
Strand 7
A
164 172anti-parallel
Strand 8
A
157 158anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 25first strand
Strand 2
A
140 141anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il