Analysis of interatomic Contacts of Structural Units in PDB entry:
6UX0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UX0 entry

There are 6 chains in PDB entry 6UX0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 74	LYS 486
B	LYS 74	HIS 487
C	LYS 74	HIS 487
D	LYS 74	HIS 487
E	TYR 75	HIS 487
F	TYR 75	HIS 487

There are118 helices in PDB entry 6UX0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	96	101	Right-handed alpha
Helix 2	AA2	A	114	116	Right-handed 310
Helix 3	AA3	A	117	122	Right-handed alpha
Helix 4	AA4	A	130	145	Right-handed alpha
Helix 5	AA5	A	146	167	Right-handed alpha
Helix 6	AA6	A	175	201	Right-handed alpha
Helix 7	AA7	A	201	215	Right-handed alpha
Helix 8	AA8	A	228	255	Right-handed alpha
Helix 9	AA9	A	262	269	Right-handed alpha
Helix 10	AB1	A	282	298	Right-handed alpha
Helix 11	AB2	A	298	311	Right-handed alpha
Helix 12	AB3	A	312	332	Right-handed alpha
Helix 13	AB4	A	339	345	Right-handed alpha
Helix 14	AB5	A	346	360	Right-handed alpha
Helix 15	AB6	A	390	395	Right-handed alpha
Helix 16	AB7	A	408	410	Right-handed 310
Helix 17	AB8	A	411	416	Right-handed alpha
Helix 18	AB9	A	429	433	Right-handed 310
Helix 19	AC1	A	436	454	Right-handed alpha
Helix 20	AC2	B	93	101	Right-handed alpha
Helix 21	AC3	B	114	116	Right-handed 310
Helix 22	AC4	B	117	122	Right-handed alpha
Helix 23	AC5	B	125	129	Right-handed 310
Helix 24	AC6	B	130	145	Right-handed alpha
Helix 25	AC7	B	146	167	Right-handed alpha
Helix 26	AC8	B	176	193	Right-handed alpha
Helix 27	AC9	B	193	215	Right-handed alpha
Helix 28	AD1	B	217	223	Right-handed alpha
Helix 29	AD2	B	228	254	Right-handed alpha
Helix 30	AD3	B	262	270	Right-handed alpha
Helix 31	AD4	B	280	298	Right-handed alpha
Helix 32	AD5	B	298	311	Right-handed alpha
Helix 33	AD6	B	312	335	Right-handed alpha
Helix 34	AD7	B	339	344	Right-handed alpha
Helix 35	AD8	B	346	360	Right-handed alpha
Helix 36	AD9	B	390	395	Right-handed alpha
Helix 37	AE1	B	408	410	Right-handed 310
Helix 38	AE2	B	411	416	Right-handed alpha
Helix 39	AE3	B	436	455	Right-handed alpha
Helix 40	AE4	C	93	102	Right-handed alpha
Helix 41	AE5	C	114	116	Right-handed 310
Helix 42	AE6	C	117	122	Right-handed alpha
Helix 43	AE7	C	130	146	Right-handed alpha
Helix 44	AE8	C	146	167	Right-handed alpha
Helix 45	AE9	C	175	193	Right-handed alpha
Helix 46	AF1	C	193	214	Right-handed alpha
Helix 47	AF2	C	217	222	Right-handed 310
Helix 48	AF3	C	228	254	Right-handed alpha
Helix 49	AF4	C	262	269	Right-handed alpha
Helix 50	AF5	C	280	298	Right-handed alpha
Helix 51	AF6	C	298	310	Right-handed alpha
Helix 52	AF7	C	313	334	Right-handed alpha
Helix 53	AF8	C	339	344	Right-handed alpha
Helix 54	AF9	C	348	360	Right-handed alpha
Helix 55	AG1	C	390	395	Right-handed alpha
Helix 56	AG2	C	408	410	Right-handed 310
Helix 57	AG3	C	411	416	Right-handed alpha
Helix 58	AG4	C	436	455	Right-handed alpha
Helix 59	AG5	D	93	102	Right-handed alpha
Helix 60	AG6	D	112	116	Right-handed 310
Helix 61	AG7	D	117	122	Right-handed alpha
Helix 62	AG8	D	130	146	Right-handed alpha
Helix 63	AG9	D	146	166	Right-handed alpha
Helix 64	AH1	D	176	200	Right-handed alpha
Helix 65	AH2	D	201	215	Right-handed alpha
Helix 66	AH3	D	217	222	Right-handed 310
Helix 67	AH4	D	228	245	Right-handed alpha
Helix 68	AH5	D	245	250	Right-handed alpha
Helix 69	AH6	D	250	255	Right-handed alpha
Helix 70	AH7	D	262	270	Right-handed alpha
Helix 71	AH8	D	280	311	Right-handed alpha
Helix 72	AH9	D	312	335	Right-handed alpha
Helix 73	AI1	D	339	345	Right-handed alpha
Helix 74	AI2	D	346	360	Right-handed alpha
Helix 75	AI3	D	390	395	Right-handed alpha
Helix 76	AI4	D	408	412	Right-handed 310
Helix 77	AI5	D	436	454	Right-handed alpha
Helix 78	AI6	E	93	103	Right-handed alpha
Helix 79	AI7	E	114	116	Right-handed 310
Helix 80	AI8	E	117	122	Right-handed alpha
Helix 81	AI9	E	125	129	Right-handed 310
Helix 82	AJ1	E	130	145	Right-handed alpha
Helix 83	AJ2	E	146	152	Right-handed alpha
Helix 84	AJ3	E	153	167	Right-handed alpha
Helix 85	AJ4	E	176	193	Right-handed alpha
Helix 86	AJ5	E	194	200	Right-handed alpha
Helix 87	AJ6	E	201	215	Right-handed alpha
Helix 88	AJ7	E	217	222	Right-handed 310
Helix 89	AJ8	E	228	255	Right-handed alpha
Helix 90	AJ9	E	262	269	Right-handed alpha
Helix 91	AK1	E	280	311	Right-handed alpha
Helix 92	AK2	E	312	335	Right-handed alpha
Helix 93	AK3	E	339	345	Right-handed alpha
Helix 94	AK4	E	346	360	Right-handed alpha
Helix 95	AK5	E	390	395	Right-handed alpha
Helix 96	AK6	E	408	410	Right-handed 310
Helix 97	AK7	E	411	418	Right-handed alpha
Helix 98	AK8	E	436	454	Right-handed alpha
Helix 99	AK9	F	93	103	Right-handed alpha
Helix 100	AL1	F	114	116	Right-handed 310
Helix 101	AL2	F	117	122	Right-handed alpha
Helix 102	AL3	F	130	145	Right-handed alpha
Helix 103	AL4	F	146	166	Right-handed alpha
Helix 104	AL5	F	176	188	Right-handed alpha
Helix 105	AL6	F	193	200	Right-handed alpha
Helix 106	AL7	F	201	215	Right-handed alpha
Helix 107	AL8	F	218	223	Right-handed alpha
Helix 108	AL9	F	228	254	Right-handed alpha
Helix 109	AM1	F	262	269	Right-handed alpha
Helix 110	AM2	F	280	298	Right-handed alpha
Helix 111	AM3	F	298	311	Right-handed alpha
Helix 112	AM4	F	312	335	Right-handed alpha
Helix 113	AM5	F	339	344	Right-handed alpha
Helix 114	AM6	F	346	360	Right-handed alpha
Helix 115	AM7	F	408	410	Right-handed 310
Helix 116	AM8	F	411	416	Right-handed alpha
Helix 117	AM9	F	429	433	Right-handed 310
Helix 118	AN1	F	436	454	Right-handed alpha

There are 19 sheets in PDB entry 6UX0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	82	first strand
Strand 2	A	87	91	anti-parallel
Strand 3	A	386	389	parallel
Strand 4	A	366	370	anti-parallel
Strand 5	A	108	109	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	174	first strand
Strand 2	A	481	485	anti-parallel
Strand 3	A	455	459	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	375	first strand
Strand 2	A	380	381	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	82	first strand
Strand 2	B	87	91	anti-parallel
Strand 3	B	386	389	parallel
Strand 4	B	366	370	anti-parallel
Strand 5	B	108	109	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	175	first strand
Strand 2	B	480	484	anti-parallel
Strand 3	B	456	459	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	374	376	first strand
Strand 2	B	379	381	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	466	467	first strand
Strand 2	B	474	475	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	80	first strand
Strand 2	C	88	91	anti-parallel
Strand 3	C	386	389	parallel
Strand 4	C	366	370	anti-parallel
Strand 5	C	108	109	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	173	174	first strand
Strand 2	C	481	482	anti-parallel
Strand 3	C	458	459	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	374	376	first strand
Strand 2	C	379	381	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	78	83	first strand
Strand 2	D	86	91	anti-parallel
Strand 3	D	386	389	parallel
Strand 4	D	366	370	anti-parallel
Strand 5	D	108	109	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	171	175	first strand
Strand 2	D	480	485	anti-parallel
Strand 3	D	455	459	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	374	375	first strand
Strand 2	D	380	381	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	88	91	first strand
Strand 2	E	386	389	parallel
Strand 3	E	366	370	anti-parallel
Strand 4	E	108	109	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	171	175	first strand
Strand 2	E	480	485	anti-parallel
Strand 3	E	455	459	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	374	376	first strand
Strand 2	E	379	381	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	78	80	first strand
Strand 2	F	89	91	anti-parallel
Strand 3	F	386	389	parallel
Strand 4	F	366	370	anti-parallel
Strand 5	F	108	109	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	171	175	first strand
Strand 2	F	480	485	anti-parallel
Strand 3	F	455	459	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	374	376	first strand
Strand 2	F	379	381	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UX0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UX0