Analysis of interatomic Contacts of Structural Units in PDB entry:
6UX4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UX4 entry

There are 8 chains in PDB entry 6UX4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 115	ALA 336
E	SER 115	ALA 336
B	SER 115	ALA 336
F	SER 115	ALA 336
C	SER 115	ALA 336
G	SER 115	ALA 336
D	SER 115	ALA 336
H	SER 115	ALA 336

There are 87 helices in PDB entry 6UX4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	124	134	Right-handed alpha
Helix 2	AA2	A	148	155	Right-handed alpha
Helix 3	AA3	A	166	173	Right-handed alpha
Helix 4	AA4	A	188	202	Right-handed alpha
Helix 5	AA5	A	213	215	Right-handed 310
Helix 6	AA6	A	216	224	Right-handed alpha
Helix 7	AA7	A	230	242	Right-handed alpha
Helix 8	AA8	A	247	256	Right-handed alpha
Helix 9	AA9	A	279	284	Right-handed alpha
Helix 10	AB1	A	284	289	Right-handed alpha
Helix 11	AB2	A	323	334	Right-handed alpha
Helix 12	AB3	E	124	133	Right-handed alpha
Helix 13	AB4	E	145	147	Right-handed 310
Helix 14	AB5	E	148	155	Right-handed alpha
Helix 15	AB6	E	166	173	Right-handed alpha
Helix 16	AB7	E	187	202	Right-handed alpha
Helix 17	AB8	E	216	224	Right-handed alpha
Helix 18	AB9	E	230	241	Right-handed alpha
Helix 19	AC1	E	246	256	Right-handed alpha
Helix 20	AC2	E	279	284	Right-handed alpha
Helix 21	AC3	E	284	289	Right-handed alpha
Helix 22	AC4	E	323	334	Right-handed alpha
Helix 23	AC5	B	124	134	Right-handed alpha
Helix 24	AC6	B	148	155	Right-handed alpha
Helix 25	AC7	B	166	171	Right-handed alpha
Helix 26	AC8	B	172	174	Right-handed 310
Helix 27	AC9	B	187	202	Right-handed alpha
Helix 28	AD1	B	217	222	Right-handed alpha
Helix 29	AD2	B	230	241	Right-handed alpha
Helix 30	AD3	B	247	256	Right-handed alpha
Helix 31	AD4	B	279	284	Right-handed alpha
Helix 32	AD5	B	284	289	Right-handed alpha
Helix 33	AD6	B	323	332	Right-handed alpha
Helix 34	AD7	F	124	133	Right-handed alpha
Helix 35	AD8	F	148	155	Right-handed alpha
Helix 36	AD9	F	166	171	Right-handed alpha
Helix 37	AE1	F	187	202	Right-handed alpha
Helix 38	AE2	F	216	223	Right-handed alpha
Helix 39	AE3	F	230	240	Right-handed alpha
Helix 40	AE4	F	247	256	Right-handed alpha
Helix 41	AE5	F	279	284	Right-handed alpha
Helix 42	AE6	F	284	289	Right-handed alpha
Helix 43	AE7	F	323	334	Right-handed alpha
Helix 44	AE8	C	124	132	Right-handed alpha
Helix 45	AE9	C	148	156	Right-handed alpha
Helix 46	AF1	C	166	173	Right-handed alpha
Helix 47	AF2	C	188	202	Right-handed alpha
Helix 48	AF3	C	213	215	Right-handed 310
Helix 49	AF4	C	216	224	Right-handed alpha
Helix 50	AF5	C	230	240	Right-handed alpha
Helix 51	AF6	C	247	256	Right-handed alpha
Helix 52	AF7	C	279	284	Right-handed alpha
Helix 53	AF8	C	284	289	Right-handed alpha
Helix 54	AF9	C	323	332	Right-handed alpha
Helix 55	AG1	G	124	133	Right-handed alpha
Helix 56	AG2	G	145	147	Right-handed 310
Helix 57	AG3	G	148	155	Right-handed alpha
Helix 58	AG4	G	166	171	Right-handed alpha
Helix 59	AG5	G	172	174	Right-handed 310
Helix 60	AG6	G	187	202	Right-handed alpha
Helix 61	AG7	G	216	224	Right-handed alpha
Helix 62	AG8	G	230	240	Right-handed alpha
Helix 63	AG9	G	247	256	Right-handed alpha
Helix 64	AH1	G	279	284	Right-handed alpha
Helix 65	AH2	G	284	289	Right-handed alpha
Helix 66	AH3	G	323	334	Right-handed alpha
Helix 67	AH4	D	124	134	Right-handed alpha
Helix 68	AH5	D	148	155	Right-handed alpha
Helix 69	AH6	D	166	171	Right-handed alpha
Helix 70	AH7	D	172	174	Right-handed 310
Helix 71	AH8	D	187	202	Right-handed alpha
Helix 72	AH9	D	217	222	Right-handed alpha
Helix 73	AI1	D	230	241	Right-handed alpha
Helix 74	AI2	D	247	256	Right-handed alpha
Helix 75	AI3	D	279	284	Right-handed alpha
Helix 76	AI4	D	284	289	Right-handed alpha
Helix 77	AI5	D	323	332	Right-handed alpha
Helix 78	AI6	H	124	133	Right-handed alpha
Helix 79	AI7	H	148	155	Right-handed alpha
Helix 80	AI8	H	166	171	Right-handed alpha
Helix 81	AI9	H	187	202	Right-handed alpha
Helix 82	AJ1	H	216	223	Right-handed alpha
Helix 83	AJ2	H	230	240	Right-handed alpha
Helix 84	AJ3	H	247	256	Right-handed alpha
Helix 85	AJ4	H	279	284	Right-handed alpha
Helix 86	AJ5	H	284	289	Right-handed alpha
Helix 87	AJ6	H	323	334	Right-handed alpha

There are 16 sheets in PDB entry 6UX4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	161	first strand
Strand 2	A	139	143	parallel
Strand 3	A	118	121	parallel
Strand 4	A	180	183	parallel
Strand 5	A	207	210	parallel
Strand 6	A	227	229	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	268	first strand
Strand 2	A	317	322	anti-parallel
Strand 3	A	292	298	anti-parallel
Strand 4	A	301	304	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	161	first strand
Strand 2	E	139	143	parallel
Strand 3	E	118	121	parallel
Strand 4	E	180	183	parallel
Strand 5	E	207	209	parallel
Strand 6	E	227	228	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	263	268	first strand
Strand 2	E	317	322	anti-parallel
Strand 3	E	292	298	anti-parallel
Strand 4	E	301	304	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	161	first strand
Strand 2	B	139	143	parallel
Strand 3	B	118	121	parallel
Strand 4	B	180	183	parallel
Strand 5	B	207	210	parallel
Strand 6	B	227	229	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	268	first strand
Strand 2	B	317	322	anti-parallel
Strand 3	B	292	297	anti-parallel
Strand 4	B	303	304	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	158	161	first strand
Strand 2	F	139	143	parallel
Strand 3	F	118	121	parallel
Strand 4	F	181	183	parallel
Strand 5	F	207	209	parallel
Strand 6	F	227	228	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	263	268	first strand
Strand 2	F	317	322	anti-parallel
Strand 3	F	292	298	anti-parallel
Strand 4	F	301	304	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	161	first strand
Strand 2	C	139	143	parallel
Strand 3	C	118	121	parallel
Strand 4	C	180	183	parallel
Strand 5	C	207	210	parallel
Strand 6	C	227	229	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	263	268	first strand
Strand 2	C	317	322	anti-parallel
Strand 3	C	292	298	anti-parallel
Strand 4	C	301	304	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	157	161	first strand
Strand 2	G	139	143	parallel
Strand 3	G	118	121	parallel
Strand 4	G	180	183	parallel
Strand 5	G	207	209	parallel
Strand 6	G	227	228	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	263	268	first strand
Strand 2	G	317	322	anti-parallel
Strand 3	G	292	298	anti-parallel
Strand 4	G	301	304	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	161	first strand
Strand 2	D	139	143	parallel
Strand 3	D	118	121	parallel
Strand 4	D	180	183	parallel
Strand 5	D	207	210	parallel
Strand 6	D	227	229	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	263	268	first strand
Strand 2	D	317	322	anti-parallel
Strand 3	D	292	297	anti-parallel
Strand 4	D	303	304	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	158	161	first strand
Strand 2	H	139	143	parallel
Strand 3	H	118	121	parallel
Strand 4	H	181	183	parallel
Strand 5	H	207	209	parallel
Strand 6	H	227	228	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	263	268	first strand
Strand 2	H	317	322	anti-parallel
Strand 3	H	292	298	anti-parallel
Strand 4	H	301	304	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UX4

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UX4