Analysis of interatomic Contacts of Structural Units in PDB entry:
6UXC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UXC entry

There are 4 chains in PDB entry 6UXC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 43VAL 210
A
 ALA 212ASN 213
B
 ALA 42VAL 210
B
 ALA 212ASN 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6UXC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 81Right-handed alpha
Helix 2
AA2
A
92 98Right-handed alpha
Helix 3
AA3
A
99 101Right-handed 310
Helix 4
AA4
A
107 115Right-handed 310
Helix 5
AA5
A
151 154Right-handed 310
Helix 6
AA6
A
170 172Right-handed 310
Helix 7
AA7
A
183 188Right-handed 310
Helix 8
AA8
A
189 213Right-handed alpha
Helix 9
AA9
B
65 81Right-handed alpha
Helix 10
AB1
B
92 99Right-handed alpha
Helix 11
AB2
B
107 112Right-handed alpha
Helix 12
AB3
B
113 115Right-handed 310
Helix 13
AB4
B
170 172Right-handed 310
Helix 14
AB5
B
185 188Right-handed 310
Helix 15
AB6
B
189 212Right-handed alpha
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There are 4 sheets in PDB entry 6UXC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
119 130parallel
Strand 3
A
44 48parallel
Strand 4
A
84 86parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
119 130parallel
Strand 3
A
138 149anti-parallel
Strand 4
A
156 168anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 53first strand
Strand 2
B
119 130parallel
Strand 3
B
44 48parallel
Strand 4
B
84 86parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 53first strand
Strand 2
B
119 130parallel
Strand 3
B
138 149anti-parallel
Strand 4
B
156 168anti-parallel
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