Analysis of interatomic Contacts of Structural Units in PDB entry:
6UXK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UXK entry

There are 4 chains in PDB entry 6UXK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0HIS 243
A
 SER 245LYS 470
B
 HIS 0HIS 243
B
 SER 245LYS 470
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6UXK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 9Right-handed alpha
Helix 2
AA2
A
11 16Right-handed alpha
Helix 3
AA3
A
16 32Right-handed alpha
Helix 4
AA4
A
44 52Right-handed alpha
Helix 5
AA5
A
53 58Right-handed 310
Helix 6
AA6
A
72 90Right-handed alpha
Helix 7
AA7
A
105 118Right-handed alpha
Helix 8
AA8
A
129 132Right-handed 310
Helix 9
AA9
A
134 138Right-handed 310
Helix 10
AB1
A
148 154Right-handed alpha
Helix 11
AB2
A
169 181Right-handed alpha
Helix 12
AB3
A
197 209Right-handed alpha
Helix 13
AB4
A
219 225Right-handed alpha
Helix 14
AB5
A
230 234Right-handed 310
Helix 15
AB6
A
275 284Right-handed alpha
Helix 16
AB7
A
292 307Right-handed alpha
Helix 17
AB8
A
308 332Right-handed alpha
Helix 18
AB9
A
338 340Right-handed 310
Helix 19
AC1
A
351 354Right-handed 310
Helix 20
AC2
A
356 367Right-handed alpha
Helix 21
AC3
A
392 398Right-handed alpha
Helix 22
AC4
A
401 427Right-handed alpha
Helix 23
AC5
A
429 436Right-handed alpha
Helix 24
AC6
A
440 456Right-handed alpha
Helix 25
AC7
B
3 9Right-handed alpha
Helix 26
AC8
B
11 16Right-handed alpha
Helix 27
AC9
B
16 32Right-handed alpha
Helix 28
AD1
B
44 52Right-handed alpha
Helix 29
AD2
B
53 58Right-handed 310
Helix 30
AD3
B
72 90Right-handed alpha
Helix 31
AD4
B
105 118Right-handed alpha
Helix 32
AD5
B
129 132Right-handed 310
Helix 33
AD6
B
134 138Right-handed 310
Helix 34
AD7
B
148 154Right-handed alpha
Helix 35
AD8
B
169 181Right-handed alpha
Helix 36
AD9
B
197 209Right-handed alpha
Helix 37
AE1
B
219 225Right-handed alpha
Helix 38
AE2
B
230 234Right-handed 310
Helix 39
AE3
B
274 284Right-handed alpha
Helix 40
AE4
B
292 307Right-handed alpha
Helix 41
AE5
B
308 332Right-handed alpha
Helix 42
AE6
B
336 340Right-handed 310
Helix 43
AE7
B
351 354Right-handed 310
Helix 44
AE8
B
356 367Right-handed alpha
Helix 45
AE9
B
392 398Right-handed alpha
Helix 46
AF1
B
401 427Right-handed alpha
Helix 47
AF2
B
429 436Right-handed alpha
Helix 48
AF3
B
440 456Right-handed alpha
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There are 8 sheets in PDB entry 6UXK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
369 370parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 63first strand
Strand 2
A
66 67anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 100first strand
Strand 2
A
252 257anti-parallel
Strand 3
A
237 241anti-parallel
Strand 4
A
211 215parallel
Strand 5
A
184 187parallel
Strand 6
A
123 127parallel
Strand 7
A
155 159parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 336first strand
Strand 2
A
345 349anti-parallel
Strand 3
A
387 391anti-parallel
Strand 4
A
372 374anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 35first strand
Strand 2
B
369 370parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 63first strand
Strand 2
B
66 67anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 100first strand
Strand 2
B
252 257anti-parallel
Strand 3
B
237 241anti-parallel
Strand 4
B
211 215parallel
Strand 5
B
184 187parallel
Strand 6
B
123 127parallel
Strand 7
B
155 159parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
345 349first strand
Strand 2
B
387 391anti-parallel
Strand 3
B
372 374anti-parallel
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