Analysis of interatomic Contacts of Structural Units in PDB entry:
6UXL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UXL entry

There are 2 chains in PDB entry 6UXL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0LYS 470
B
 HIS 0LYS 470
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6UXL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 8Right-handed alpha
Helix 2
AA2
A
11 16Right-handed alpha
Helix 3
AA3
A
16 32Right-handed alpha
Helix 4
AA4
A
44 52Right-handed alpha
Helix 5
AA5
A
53 58Right-handed 310
Helix 6
AA6
A
72 90Right-handed alpha
Helix 7
AA7
A
105 118Right-handed alpha
Helix 8
AA8
A
134 138Right-handed 310
Helix 9
AA9
A
148 154Right-handed alpha
Helix 10
AB1
A
169 181Right-handed alpha
Helix 11
AB2
A
197 209Right-handed alpha
Helix 12
AB3
A
219 225Right-handed alpha
Helix 13
AB4
A
230 234Right-handed 310
Helix 14
AB5
A
275 284Right-handed alpha
Helix 15
AB6
A
292 307Right-handed alpha
Helix 16
AB7
A
308 332Right-handed alpha
Helix 17
AB8
A
338 340Right-handed 310
Helix 18
AB9
A
351 354Right-handed 310
Helix 19
AC1
A
356 367Right-handed alpha
Helix 20
AC2
A
392 397Right-handed alpha
Helix 21
AC3
A
401 427Right-handed alpha
Helix 22
AC4
A
429 436Right-handed alpha
Helix 23
AC5
A
440 455Right-handed alpha
Helix 24
AC6
A
463 467Right-handed 310
Helix 25
AC7
B
3 8Right-handed alpha
Helix 26
AC8
B
11 16Right-handed alpha
Helix 27
AC9
B
16 32Right-handed alpha
Helix 28
AD1
B
44 52Right-handed alpha
Helix 29
AD2
B
53 58Right-handed 310
Helix 30
AD3
B
72 90Right-handed alpha
Helix 31
AD4
B
105 118Right-handed alpha
Helix 32
AD5
B
134 138Right-handed 310
Helix 33
AD6
B
148 154Right-handed alpha
Helix 34
AD7
B
169 181Right-handed alpha
Helix 35
AD8
B
197 209Right-handed alpha
Helix 36
AD9
B
219 225Right-handed alpha
Helix 37
AE1
B
230 234Right-handed 310
Helix 38
AE2
B
275 284Right-handed alpha
Helix 39
AE3
B
292 307Right-handed alpha
Helix 40
AE4
B
308 332Right-handed alpha
Helix 41
AE5
B
338 340Right-handed 310
Helix 42
AE6
B
351 354Right-handed 310
Helix 43
AE7
B
356 367Right-handed alpha
Helix 44
AE8
B
392 397Right-handed alpha
Helix 45
AE9
B
401 427Right-handed alpha
Helix 46
AF1
B
429 435Right-handed alpha
Helix 47
AF2
B
440 455Right-handed alpha
Helix 48
AF3
B
463 467Right-handed 310
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There are 8 sheets in PDB entry 6UXL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
369 370parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 63first strand
Strand 2
A
66 67anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 100first strand
Strand 2
A
252 257anti-parallel
Strand 3
A
237 241anti-parallel
Strand 4
A
211 215parallel
Strand 5
A
184 187parallel
Strand 6
A
123 127parallel
Strand 7
A
155 159parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 336first strand
Strand 2
A
345 349anti-parallel
Strand 3
A
387 391anti-parallel
Strand 4
A
372 374anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 35first strand
Strand 2
B
369 370parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 63first strand
Strand 2
B
66 67anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 100first strand
Strand 2
B
252 257anti-parallel
Strand 3
B
237 241anti-parallel
Strand 4
B
211 215parallel
Strand 5
B
184 187parallel
Strand 6
B
123 127parallel
Strand 7
B
155 159parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
335 336first strand
Strand 2
B
345 349anti-parallel
Strand 3
B
387 391anti-parallel
Strand 4
B
372 374anti-parallel
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