Analysis of interatomic Contacts of Structural Units in PDB entry:
6UY0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UY0 entry

There is 1 chain in PDB entry 6UY0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 203VAL 1530
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 6UY0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
214 221Right-handed alpha
Helix 2
AA2
A
224 234Right-handed alpha
Helix 3
AA3
A
245 248Right-handed 310
Helix 4
AA4
A
249 268Right-handed alpha
Helix 5
AA5
A
321 326Right-handed alpha
Helix 6
AA6
A
326 355Right-handed alpha
Helix 7
AA7
A
359 408Right-handed alpha
Helix 8
AA8
A
411 418Right-handed alpha
Helix 9
AA9
A
419 441Right-handed alpha
Helix 10
AB1
A
442 462Right-handed alpha
Helix 11
AB2
A
466 511Right-handed alpha
Helix 12
AB3
A
511 519Right-handed alpha
Helix 13
AB4
A
520 555Right-handed alpha
Helix 14
AB5
A
555 572Right-handed alpha
Helix 15
AB6
A
580 590Right-handed alpha
Helix 16
AB7
A
592 597Right-handed alpha
Helix 17
AB8
A
598 621Right-handed alpha
Helix 18
AB9
A
626 630Right-handed 310
Helix 19
AC1
A
683 692Right-handed alpha
Helix 20
AC2
A
721 728Right-handed alpha
Helix 21
AC3
A
733 744Right-handed alpha
Helix 22
AC4
A
746 753Right-handed alpha
Helix 23
AC5
A
769 785Right-handed alpha
Helix 24
AC6
A
799 810Right-handed alpha
Helix 25
AC7
A
831 835Right-handed 310
Helix 26
AC8
A
851 858Right-handed alpha
Helix 27
AC9
A
860 870Right-handed alpha
Helix 28
AD1
A
958 970Right-handed alpha
Helix 29
AD2
A
970 1000Right-handed alpha
Helix 30
AD3
A
1009 1058Right-handed alpha
Helix 31
AD4
A
1059 1066Right-handed alpha
Helix 32
AD5
A
1067 1111Right-handed alpha
Helix 33
AD6
A
1112 1115Right-handed 310
Helix 34
AD7
A
1117 1147Right-handed alpha
Helix 35
AD8
A
1147 1160Right-handed alpha
Helix 36
AD9
A
1160 1168Right-handed alpha
Helix 37
AE1
A
1169 1220Right-handed alpha
Helix 38
AE2
A
1225 1257Right-handed alpha
Helix 39
AE3
A
1257 1265Right-handed alpha
Helix 40
AE4
A
1332 1340Right-handed alpha
Helix 41
AE5
A
1361 1367Right-handed alpha
Helix 42
AE6
A
1383 1388Right-handed alpha
Helix 43
AE7
A
1394 1405Right-handed alpha
Helix 44
AE8
A
1407 1413Right-handed alpha
Helix 45
AE9
A
1430 1446Right-handed alpha
Helix 46
AF1
A
1460 1475Right-handed alpha
Helix 47
AF2
A
1486 1490Right-handed 310
Helix 48
AF3
A
1509 1517Right-handed alpha
Helix 49
AF4
A
1519 1528Right-handed alpha
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There are 5 sheets in PDB entry 6UY0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
661 669first strand
Strand 2
A
642 652anti-parallel
Strand 3
A
696 704anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
708 711first strand
Strand 2
A
788 792parallel
Strand 3
A
821 825parallel
Strand 4
A
673 678parallel
Strand 5
A
837 842parallel
Strand 6
A
845 848anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1309 1316first strand
Strand 2
A
1292 1299anti-parallel
Strand 3
A
1347 1352anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1369 1372first strand
Strand 2
A
1449 1453parallel
Strand 3
A
1479 1483parallel
Strand 4
A
1321 1325parallel
Strand 5
A
1495 1498parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1381 1382first strand
Strand 2
A
1421 1422anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il