Analysis of interatomic Contacts of Structural Units in PDB entry:
6UZI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UZI entry

There are 3 chains in PDB entry 6UZI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	MET 467
B	MET 1	MET 467
C	HIS -2	ALA 428

There are 64 helices in PDB entry 6UZI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	25	Right-handed alpha
Helix 2	AA2	A	39	45	Right-handed alpha
Helix 3	AA3	A	46	66	Right-handed alpha
Helix 4	AA4	A	80	106	Right-handed alpha
Helix 5	AA5	A	163	168	Right-handed alpha
Helix 6	AA6	A	183	196	Right-handed alpha
Helix 7	AA7	A	214	229	Right-handed alpha
Helix 8	AA8	A	281	286	Right-handed alpha
Helix 9	AA9	A	312	315	Right-handed 310
Helix 10	AB1	A	320	336	Right-handed alpha
Helix 11	AB2	A	343	347	Right-handed 310
Helix 12	AB3	A	363	370	Right-handed alpha
Helix 13	AB4	A	384	391	Right-handed alpha
Helix 14	AB5	A	417	431	Right-handed alpha
Helix 15	AB6	A	434	440	Right-handed alpha
Helix 16	AB7	A	449	462	Right-handed alpha
Helix 17	AB8	B	12	25	Right-handed alpha
Helix 18	AB9	B	39	45	Right-handed alpha
Helix 19	AC1	B	46	66	Right-handed alpha
Helix 20	AC2	B	66	71	Right-handed alpha
Helix 21	AC3	B	80	106	Right-handed alpha
Helix 22	AC4	B	163	168	Right-handed alpha
Helix 23	AC5	B	183	196	Right-handed alpha
Helix 24	AC6	B	214	228	Right-handed alpha
Helix 25	AC7	B	312	315	Right-handed 310
Helix 26	AC8	B	320	336	Right-handed alpha
Helix 27	AC9	B	343	347	Right-handed 310
Helix 28	AD1	B	363	370	Right-handed alpha
Helix 29	AD2	B	384	391	Right-handed alpha
Helix 30	AD3	B	417	431	Right-handed alpha
Helix 31	AD4	B	434	441	Right-handed alpha
Helix 32	AD5	B	449	462	Right-handed alpha
Helix 33	AD6	C	12	25	Right-handed alpha
Helix 34	AD7	C	39	45	Right-handed alpha
Helix 35	AD8	C	46	66	Right-handed alpha
Helix 36	AD9	C	80	106	Right-handed alpha
Helix 37	AE1	C	163	168	Right-handed alpha
Helix 38	AE2	C	183	196	Right-handed alpha
Helix 39	AE3	C	214	228	Right-handed alpha
Helix 40	AE4	C	281	286	Right-handed alpha
Helix 41	AE5	C	312	315	Right-handed 310
Helix 42	AE6	C	320	336	Right-handed alpha
Helix 43	AE7	C	343	347	Right-handed 310
Helix 44	AE8	C	363	370	Right-handed alpha
Helix 45	AE9	C	384	391	Right-handed alpha
Helix 46	AF1	C	417	431	Right-handed alpha
Helix 47	AF2	C	434	441	Right-handed alpha
Helix 48	AF3	C	449	462	Right-handed alpha
Helix 49	AF4	D	12	25	Right-handed alpha
Helix 50	AF5	D	39	45	Right-handed alpha
Helix 51	AF6	D	46	66	Right-handed alpha
Helix 52	AF7	D	80	106	Right-handed alpha
Helix 53	AF8	D	163	168	Right-handed alpha
Helix 54	AF9	D	183	196	Right-handed alpha
Helix 55	AG1	D	214	228	Right-handed alpha
Helix 56	AG2	D	281	286	Right-handed alpha
Helix 57	AG3	D	312	315	Right-handed 310
Helix 58	AG4	D	320	336	Right-handed alpha
Helix 59	AG5	D	343	347	Right-handed 310
Helix 60	AG6	D	363	370	Right-handed alpha
Helix 61	AG7	D	384	391	Right-handed alpha
Helix 62	AG8	D	417	431	Right-handed alpha
Helix 63	AG9	D	434	441	Right-handed alpha
Helix 64	AH1	D	449	462	Right-handed alpha

There are 28 sheets in PDB entry 6UZI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	112	first strand
Strand 2	A	29	33	parallel
Strand 3	A	2	9	parallel
Strand 4	A	132	142	parallel
Strand 5	A	122	126	anti-parallel
Strand 6	A	114	117	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	112	first strand
Strand 2	A	29	33	parallel
Strand 3	A	2	9	parallel
Strand 4	A	132	142	parallel
Strand 5	A	308	310	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	72	73	first strand
Strand 2	B	78	79	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	79	first strand
Strand 2	B	72	73	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	148	first strand
Strand 2	A	273	275	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	162	first strand
Strand 2	A	266	269	parallel
Strand 3	A	176	180	parallel
Strand 4	A	199	203	parallel
Strand 5	A	231	233	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	237	244	first strand
Strand 2	A	247	253	anti-parallel
Strand 3	A	259	264	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	349	351	first strand
Strand 2	A	356	361	anti-parallel
Strand 3	A	408	415	anti-parallel
Strand 4	A	396	402	anti-parallel
Strand 5	A	374	380	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	112	first strand
Strand 2	B	29	33	parallel
Strand 3	B	3	9	parallel
Strand 4	B	132	142	parallel
Strand 5	B	122	126	anti-parallel
Strand 6	B	114	117	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	112	first strand
Strand 2	B	29	33	parallel
Strand 3	B	3	9	parallel
Strand 4	B	132	142	parallel
Strand 5	B	308	310	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	148	first strand
Strand 2	B	273	275	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	162	first strand
Strand 2	B	266	269	parallel
Strand 3	B	176	180	parallel
Strand 4	B	199	203	parallel
Strand 5	B	231	233	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	237	244	first strand
Strand 2	B	247	253	anti-parallel
Strand 3	B	259	264	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	349	351	first strand
Strand 2	B	356	361	anti-parallel
Strand 3	B	408	415	anti-parallel
Strand 4	B	396	402	anti-parallel
Strand 5	B	374	380	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	109	112	first strand
Strand 2	C	29	33	parallel
Strand 3	C	3	9	parallel
Strand 4	C	132	142	parallel
Strand 5	C	122	126	anti-parallel
Strand 6	C	114	117	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	109	112	first strand
Strand 2	C	29	33	parallel
Strand 3	C	3	9	parallel
Strand 4	C	132	142	parallel
Strand 5	C	308	310	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	72	73	first strand
Strand 2	D	78	79	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	79	first strand
Strand 2	D	72	73	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	148	first strand
Strand 2	C	273	275	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	161	162	first strand
Strand 2	C	266	269	parallel
Strand 3	C	176	180	parallel
Strand 4	C	199	203	parallel
Strand 5	C	231	233	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	237	244	first strand
Strand 2	C	247	253	anti-parallel
Strand 3	C	259	264	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	349	351	first strand
Strand 2	C	356	361	anti-parallel
Strand 3	C	408	415	anti-parallel
Strand 4	C	396	402	anti-parallel
Strand 5	C	374	380	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	109	112	first strand
Strand 2	D	29	33	parallel
Strand 3	D	3	9	parallel
Strand 4	D	132	142	parallel
Strand 5	D	122	126	anti-parallel
Strand 6	D	114	117	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	109	112	first strand
Strand 2	D	29	33	parallel
Strand 3	D	3	9	parallel
Strand 4	D	132	142	parallel
Strand 5	D	308	310	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	146	148	first strand
Strand 2	D	273	275	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	162	first strand
Strand 2	D	266	269	parallel
Strand 3	D	176	180	parallel
Strand 4	D	199	203	parallel
Strand 5	D	231	233	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	237	244	first strand
Strand 2	D	247	253	anti-parallel
Strand 3	D	259	264	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	349	351	first strand
Strand 2	D	356	361	anti-parallel
Strand 3	D	408	415	anti-parallel
Strand 4	D	396	402	anti-parallel
Strand 5	D	374	380	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UZI

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UZI