Analysis of interatomic Contacts of Structural Units in PDB entry:
6UZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UZZ entry

There are 8 chains in PDB entry 6UZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 104GLY 568
B
THR 6LYS 149
C
THR 104GLY 568
D
THR 6LYS 149
E
THR 104GLY 568
F
THR 6LYS 149
G
THR 104GLY 568
H
THR 6LYS 149
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are116 helices in PDB entry 6UZZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
104 115Right-handed alpha
Helix 2
AA2
A
120 143Right-handed alpha
Helix 3
AA3
A
150 155Right-handed alpha
Helix 4
AA4
A
156 178Right-handed alpha
Helix 5
AA5
A
179 181Right-handed 310
Helix 6
AA6
A
186 194Right-handed alpha
Helix 7
AA7
A
196 216Right-handed alpha
Helix 8
AA8
A
224 237Right-handed alpha
Helix 9
AA9
A
238 241Right-handed 310
Helix 10
AB1
A
245 258Right-handed alpha
Helix 11
AB2
A
258 285Right-handed alpha
Helix 12
AB3
A
298 311Right-handed alpha
Helix 13
AB4
A
322 336Right-handed alpha
Helix 14
AB5
A
337 358Right-handed alpha
Helix 15
AB6
A
359 361Right-handed 310
Helix 16
AB7
A
363 366Right-handed 310
Helix 17
AB8
A
367 384Right-handed alpha
Helix 18
AB9
A
389 395Right-handed 310
Helix 19
AC1
A
509 532Right-handed alpha
Helix 20
AC2
A
537 567Right-handed alpha
Helix 21
AC3
B
7 22Right-handed alpha
Helix 22
AC4
B
29 40Right-handed alpha
Helix 23
AC5
B
45 54Right-handed alpha
Helix 24
AC6
B
65 75Right-handed alpha
Helix 25
AC7
B
79 91Right-handed alpha
Helix 26
AC8
B
92 94Right-handed 310
Helix 27
AC9
B
103 113Right-handed alpha
Helix 28
AD1
B
118 128Right-handed alpha
Helix 29
AD2
B
139 147Right-handed alpha
Helix 30
AD3
C
105 115Right-handed alpha
Helix 31
AD4
C
120 143Right-handed alpha
Helix 32
AD5
C
150 155Right-handed alpha
Helix 33
AD6
C
156 178Right-handed alpha
Helix 34
AD7
C
179 181Right-handed 310
Helix 35
AD8
C
186 194Right-handed alpha
Helix 36
AD9
C
196 216Right-handed alpha
Helix 37
AE1
C
224 237Right-handed alpha
Helix 38
AE2
C
238 241Right-handed 310
Helix 39
AE3
C
245 258Right-handed alpha
Helix 40
AE4
C
258 285Right-handed alpha
Helix 41
AE5
C
298 311Right-handed alpha
Helix 42
AE6
C
322 336Right-handed alpha
Helix 43
AE7
C
337 358Right-handed alpha
Helix 44
AE8
C
359 361Right-handed 310
Helix 45
AE9
C
363 366Right-handed 310
Helix 46
AF1
C
367 384Right-handed alpha
Helix 47
AF2
C
389 395Right-handed 310
Helix 48
AF3
C
509 532Right-handed alpha
Helix 49
AF4
C
537 567Right-handed alpha
Helix 50
AF5
D
7 22Right-handed alpha
Helix 51
AF6
D
29 40Right-handed alpha
Helix 52
AF7
D
45 54Right-handed alpha
Helix 53
AF8
D
65 75Right-handed alpha
Helix 54
AF9
D
79 91Right-handed alpha
Helix 55
AG1
D
92 94Right-handed 310
Helix 56
AG2
D
103 113Right-handed alpha
Helix 57
AG3
D
118 128Right-handed alpha
Helix 58
AG4
D
139 147Right-handed alpha
Helix 59
AG5
E
105 115Right-handed alpha
Helix 60
AG6
E
120 143Right-handed alpha
Helix 61
AG7
E
150 155Right-handed alpha
Helix 62
AG8
E
156 178Right-handed alpha
Helix 63
AG9
E
179 181Right-handed 310
Helix 64
AH1
E
186 194Right-handed alpha
Helix 65
AH2
E
196 216Right-handed alpha
Helix 66
AH3
E
224 237Right-handed alpha
Helix 67
AH4
E
238 241Right-handed 310
Helix 68
AH5
E
245 258Right-handed alpha
Helix 69
AH6
E
258 285Right-handed alpha
Helix 70
AH7
E
298 311Right-handed alpha
Helix 71
AH8
E
322 336Right-handed alpha
Helix 72
AH9
E
337 358Right-handed alpha
Helix 73
AI1
E
359 361Right-handed 310
Helix 74
AI2
E
363 366Right-handed 310
Helix 75
AI3
E
367 384Right-handed alpha
Helix 76
AI4
E
389 395Right-handed 310
Helix 77
AI5
E
509 532Right-handed alpha
Helix 78
AI6
E
537 567Right-handed alpha
Helix 79
AI7
F
7 22Right-handed alpha
Helix 80
AI8
F
29 40Right-handed alpha
Helix 81
AI9
F
45 54Right-handed alpha
Helix 82
AJ1
F
65 75Right-handed alpha
Helix 83
AJ2
F
79 91Right-handed alpha
Helix 84
AJ3
F
92 94Right-handed 310
Helix 85
AJ4
F
103 113Right-handed alpha
Helix 86
AJ5
F
118 128Right-handed alpha
Helix 87
AJ6
F
139 147Right-handed alpha
Helix 88
AJ7
G
105 115Right-handed alpha
Helix 89
AJ8
G
120 143Right-handed alpha
Helix 90
AJ9
G
150 155Right-handed alpha
Helix 91
AK1
G
156 178Right-handed alpha
Helix 92
AK2
G
179 181Right-handed 310
Helix 93
AK3
G
186 194Right-handed alpha
Helix 94
AK4
G
196 216Right-handed alpha
Helix 95
AK5
G
224 237Right-handed alpha
Helix 96
AK6
G
238 241Right-handed 310
Helix 97
AK7
G
245 258Right-handed alpha
Helix 98
AK8
G
258 285Right-handed alpha
Helix 99
AK9
G
298 311Right-handed alpha
Helix 100
AL1
G
322 336Right-handed alpha
Helix 101
AL2
G
337 358Right-handed alpha
Helix 102
AL3
G
359 361Right-handed 310
Helix 103
AL4
G
363 366Right-handed 310
Helix 104
AL5
G
367 384Right-handed alpha
Helix 105
AL6
G
389 395Right-handed 310
Helix 106
AL7
G
509 532Right-handed alpha
Helix 107
AL8
G
537 567Right-handed alpha
Helix 108
AL9
H
7 22Right-handed alpha
Helix 109
AM1
H
29 40Right-handed alpha
Helix 110
AM2
H
45 54Right-handed alpha
Helix 111
AM3
H
65 75Right-handed alpha
Helix 112
AM4
H
79 91Right-handed alpha
Helix 113
AM5
H
92 94Right-handed 310
Helix 114
AM6
H
103 113Right-handed alpha
Helix 115
AM7
H
118 128Right-handed alpha
Helix 116
AM8
H
139 147Right-handed alpha
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There are 4 sheets in PDB entry 6UZZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
100 102first strand
Strand 2
B
136 138anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
100 102first strand
Strand 2
D
136 138anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
100 102first strand
Strand 2
F
136 138anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
100 102first strand
Strand 2
H
136 138anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il