Analysis of interatomic Contacts of Structural Units in PDB entry:
6V02


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6V02 entry

There is 1 chain in PDB entry 6V02 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 8GLU 727
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6V02. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 14Right-handed 310
Helix 2
AA2
A
123 126Right-handed 310
Helix 3
AA3
A
152 155Right-handed 310
Helix 4
AA4
A
268 270Right-handed 310
Helix 5
AA5
A
280 283Right-handed 310
Helix 6
AA6
A
429 431Right-handed 310
Helix 7
AA7
A
606 609Right-handed 310
Helix 8
AA8
A
722 725Right-handed 310
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There are 10 sheets in PDB entry 6V02. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 22first strand
Strand 2
A
27 31anti-parallel
Strand 3
A
46 50anti-parallel
Strand 4
A
59 63anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 70first strand
Strand 2
A
73 77anti-parallel
Strand 3
A
92 99anti-parallel
Strand 4
A
115 122parallel
Strand 5
A
106 111anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 141first strand
Strand 2
A
149 150anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 163first strand
Strand 2
A
171 174anti-parallel
Strand 3
A
199 202anti-parallel
Strand 4
A
207 211anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 220first strand
Strand 2
A
224 230anti-parallel
Strand 3
A
246 252anti-parallel
Strand 4
A
272 278parallel
Strand 5
A
264 267anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 290first strand
Strand 2
A
366 371anti-parallel
Strand 3
A
374 379anti-parallel
Strand 4
A
392 399anti-parallel
Strand 5
A
420 427parallel
Strand 6
A
409 417anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 328first strand
Strand 2
A
346 350anti-parallel
Strand 3
A
357 359anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
587 588first strand
Strand 2
A
664 666anti-parallel
Strand 3
A
669 674anti-parallel
Strand 4
A
690 696anti-parallel
Strand 5
A
716 721parallel
Strand 6
A
705 708anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
593 595first strand
Strand 2
A
602 604anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
615 618first strand
Strand 2
A
623 626anti-parallel
Strand 3
A
641 646anti-parallel
Strand 4
A
653 658anti-parallel
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