Analysis of interatomic Contacts of Structural Units in PDB entry:
6V04


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6V04 entry

There is 1 chain in PDB entry 6V04 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 9ARG 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6V04. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 32Right-handed alpha
Helix 2
AA2
A
32 37Right-handed alpha
Helix 3
AA3
A
114 139Right-handed alpha
Helix 4
AA4
A
168 173Right-handed alpha
Helix 5
AA5
A
243 247Right-handed 310
Helix 6
AA6
A
250 277Right-handed alpha
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There are 2 sheets in PDB entry 6V04. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 19first strand
Strand 2
A
102 109anti-parallel
Strand 3
A
89 97anti-parallel
Strand 4
A
75 82anti-parallel
Strand 5
A
62 71anti-parallel
Strand 6
A
52 56anti-parallel
Strand 7
A
42 43anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 156first strand
Strand 2
A
235 242anti-parallel
Strand 3
A
222 229anti-parallel
Strand 4
A
208 213anti-parallel
Strand 5
A
195 204anti-parallel
Strand 6
A
182 186anti-parallel
Strand 7
A
175 177anti-parallel
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