Analysis of interatomic Contacts of Structural Units in PDB entry:
6V0A

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6V0A entry

There are 6 chains in PDB entry 6V0A (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 35	PRO 480
B	ILE 35	GLY 479
C	ILE 35	TYR 478
D	ILE 35	PRO 480
E	ILE 35	PRO 480
F	ILE 35	TYR 478

There are179 helices in PDB entry 6V0A. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	41	46	Right-handed alpha
Helix 2	AA2	A	49	58	Right-handed alpha
Helix 3	AA3	A	59	61	Right-handed 310
Helix 4	AA4	A	74	78	Right-handed 310
Helix 5	AA5	A	81	86	Right-handed alpha
Helix 6	AA6	A	86	93	Right-handed alpha
Helix 7	AA7	A	96	100	Right-handed 310
Helix 8	AA8	A	107	109	Right-handed 310
Helix 9	AA9	A	110	118	Right-handed alpha
Helix 10	AB1	A	119	131	Right-handed 310
Helix 11	AB2	A	136	145	Right-handed alpha
Helix 12	AB3	A	145	151	Right-handed alpha
Helix 13	AB4	A	152	159	Right-handed alpha
Helix 14	AB5	A	160	165	Right-handed 310
Helix 15	AB6	A	170	174	Right-handed 310
Helix 16	AB7	A	189	197	Right-handed alpha
Helix 17	AB8	A	205	216	Right-handed alpha
Helix 18	AB9	A	247	257	Right-handed alpha
Helix 19	AC1	A	258	262	Right-handed 310
Helix 20	AC2	A	279	286	Right-handed alpha
Helix 21	AC3	A	288	293	Right-handed alpha
Helix 22	AC4	A	296	302	Right-handed alpha
Helix 23	AC5	A	319	323	Right-handed 310
Helix 24	AC6	A	325	325	Right-handed 310
Helix 25	AC7	A	327	331	Right-handed 310
Helix 26	AC8	A	335	377	Right-handed alpha
Helix 27	AC9	A	382	406	Right-handed alpha
Helix 28	AD1	A	413	442	Right-handed alpha
Helix 29	AD2	A	453	459	Right-handed alpha
Helix 30	AD3	A	469	473	Right-handed 310
Helix 31	AD4	B	41	46	Right-handed alpha
Helix 32	AD5	B	49	58	Right-handed alpha
Helix 33	AD6	B	59	61	Right-handed 310
Helix 34	AD7	B	74	78	Right-handed 310
Helix 35	AD8	B	81	86	Right-handed alpha
Helix 36	AD9	B	86	93	Right-handed alpha
Helix 37	AE1	B	96	100	Right-handed 310
Helix 38	AE2	B	107	109	Right-handed 310
Helix 39	AE3	B	110	118	Right-handed alpha
Helix 40	AE4	B	121	131	Right-handed 310
Helix 41	AE5	B	136	145	Right-handed alpha
Helix 42	AE6	B	145	151	Right-handed alpha
Helix 43	AE7	B	152	159	Right-handed alpha
Helix 44	AE8	B	160	165	Right-handed 310
Helix 45	AE9	B	170	174	Right-handed 310
Helix 46	AF1	B	189	198	Right-handed alpha
Helix 47	AF2	B	200	204	Right-handed 310
Helix 48	AF3	B	205	213	Right-handed alpha
Helix 49	AF4	B	247	257	Right-handed alpha
Helix 50	AF5	B	258	262	Right-handed 310
Helix 51	AF6	B	279	285	Right-handed alpha
Helix 52	AF7	B	288	293	Right-handed alpha
Helix 53	AF8	B	296	302	Right-handed alpha
Helix 54	AF9	B	319	323	Right-handed 310
Helix 55	AG1	B	327	331	Right-handed 310
Helix 56	AG2	B	335	377	Right-handed alpha
Helix 57	AG3	B	382	406	Right-handed alpha
Helix 58	AG4	B	413	442	Right-handed alpha
Helix 59	AG5	B	453	459	Right-handed alpha
Helix 60	AG6	B	469	473	Right-handed 310
Helix 61	AG7	C	41	46	Right-handed alpha
Helix 62	AG8	C	49	58	Right-handed alpha
Helix 63	AG9	C	59	61	Right-handed 310
Helix 64	AH1	C	74	78	Right-handed 310
Helix 65	AH2	C	81	86	Right-handed alpha
Helix 66	AH3	C	86	94	Right-handed alpha
Helix 67	AH4	C	96	100	Right-handed 310
Helix 68	AH5	C	107	109	Right-handed 310
Helix 69	AH6	C	110	118	Right-handed alpha
Helix 70	AH7	C	119	131	Right-handed 310
Helix 71	AH8	C	136	143	Right-handed alpha
Helix 72	AH9	C	145	151	Right-handed alpha
Helix 73	AI1	C	152	159	Right-handed alpha
Helix 74	AI2	C	170	175	Right-handed alpha
Helix 75	AI3	C	189	197	Right-handed alpha
Helix 76	AI4	C	200	204	Right-handed 310
Helix 77	AI5	C	205	216	Right-handed alpha
Helix 78	AI6	C	247	257	Right-handed alpha
Helix 79	AI7	C	258	262	Right-handed 310
Helix 80	AI8	C	279	286	Right-handed alpha
Helix 81	AI9	C	288	293	Right-handed alpha
Helix 82	AJ1	C	296	302	Right-handed alpha
Helix 83	AJ2	C	319	323	Right-handed 310
Helix 84	AJ3	C	327	331	Right-handed 310
Helix 85	AJ4	C	335	377	Right-handed alpha
Helix 86	AJ5	C	382	406	Right-handed alpha
Helix 87	AJ6	C	413	442	Right-handed alpha
Helix 88	AJ7	C	453	459	Right-handed alpha
Helix 89	AJ8	C	469	473	Right-handed 310
Helix 90	AJ9	D	41	46	Right-handed alpha
Helix 91	AK1	D	49	58	Right-handed alpha
Helix 92	AK2	D	59	61	Right-handed 310
Helix 93	AK3	D	74	78	Right-handed 310
Helix 94	AK4	D	81	86	Right-handed alpha
Helix 95	AK5	D	86	93	Right-handed alpha
Helix 96	AK6	D	96	100	Right-handed 310
Helix 97	AK7	D	107	109	Right-handed 310
Helix 98	AK8	D	110	118	Right-handed alpha
Helix 99	AK9	D	121	131	Right-handed 310
Helix 100	AL1	D	136	145	Right-handed alpha
Helix 101	AL2	D	145	151	Right-handed alpha
Helix 102	AL3	D	152	159	Right-handed alpha
Helix 103	AL4	D	160	165	Right-handed 310
Helix 104	AL5	D	170	174	Right-handed 310
Helix 105	AL6	D	189	197	Right-handed alpha
Helix 106	AL7	D	200	204	Right-handed 310
Helix 107	AL8	D	205	216	Right-handed alpha
Helix 108	AL9	D	247	257	Right-handed alpha
Helix 109	AM1	D	258	262	Right-handed 310
Helix 110	AM2	D	279	286	Right-handed alpha
Helix 111	AM3	D	288	293	Right-handed alpha
Helix 112	AM4	D	296	302	Right-handed alpha
Helix 113	AM5	D	319	323	Right-handed 310
Helix 114	AM6	D	327	331	Right-handed 310
Helix 115	AM7	D	335	377	Right-handed alpha
Helix 116	AM8	D	382	406	Right-handed alpha
Helix 117	AM9	D	413	442	Right-handed alpha
Helix 118	AN1	D	453	459	Right-handed alpha
Helix 119	AN2	D	469	473	Right-handed 310
Helix 120	AN3	E	41	46	Right-handed alpha
Helix 121	AN4	E	49	58	Right-handed alpha
Helix 122	AN5	E	59	61	Right-handed 310
Helix 123	AN6	E	81	86	Right-handed alpha
Helix 124	AN7	E	86	93	Right-handed alpha
Helix 125	AN8	E	96	100	Right-handed 310
Helix 126	AN9	E	107	109	Right-handed 310
Helix 127	AO1	E	110	117	Right-handed alpha
Helix 128	AO2	E	119	124	Right-handed alpha
Helix 129	AO3	E	125	131	Right-handed 310
Helix 130	AO4	E	136	145	Right-handed alpha
Helix 131	AO5	E	145	151	Right-handed alpha
Helix 132	AO6	E	152	159	Right-handed alpha
Helix 133	AO7	E	160	165	Right-handed 310
Helix 134	AO8	E	170	174	Right-handed 310
Helix 135	AO9	E	189	197	Right-handed alpha
Helix 136	AP1	E	200	204	Right-handed 310
Helix 137	AP2	E	205	216	Right-handed alpha
Helix 138	AP3	E	247	257	Right-handed alpha
Helix 139	AP4	E	258	262	Right-handed 310
Helix 140	AP5	E	279	285	Right-handed alpha
Helix 141	AP6	E	288	293	Right-handed alpha
Helix 142	AP7	E	296	302	Right-handed alpha
Helix 143	AP8	E	319	323	Right-handed 310
Helix 144	AP9	E	327	331	Right-handed 310
Helix 145	AQ1	E	335	377	Right-handed alpha
Helix 146	AQ2	E	382	406	Right-handed alpha
Helix 147	AQ3	E	413	442	Right-handed alpha
Helix 148	AQ4	E	454	455	Right-handed 310
Helix 149	AQ5	E	457	459	Right-handed 310
Helix 150	AQ6	E	469	473	Right-handed 310
Helix 151	AQ7	F	41	47	Right-handed alpha
Helix 152	AQ8	F	49	58	Right-handed alpha
Helix 153	AQ9	F	59	61	Right-handed 310
Helix 154	AR1	F	74	78	Right-handed 310
Helix 155	AR2	F	81	86	Right-handed alpha
Helix 156	AR3	F	86	93	Right-handed alpha
Helix 157	AR4	F	96	100	Right-handed 310
Helix 158	AR5	F	107	109	Right-handed 310
Helix 159	AR6	F	110	118	Right-handed alpha
Helix 160	AR7	F	119	124	Right-handed alpha
Helix 161	AR8	F	125	131	Right-handed 310
Helix 162	AR9	F	136	145	Right-handed alpha
Helix 163	AS1	F	145	151	Right-handed alpha
Helix 164	AS2	F	152	159	Right-handed alpha
Helix 165	AS3	F	170	174	Right-handed 310
Helix 166	AS4	F	189	197	Right-handed alpha
Helix 167	AS5	F	205	216	Right-handed alpha
Helix 168	AS6	F	247	257	Right-handed alpha
Helix 169	AS7	F	258	262	Right-handed 310
Helix 170	AS8	F	279	286	Right-handed alpha
Helix 171	AS9	F	288	293	Right-handed alpha
Helix 172	AT1	F	296	302	Right-handed alpha
Helix 173	AT2	F	319	323	Right-handed 310
Helix 174	AT3	F	327	331	Right-handed 310
Helix 175	AT4	F	335	377	Right-handed alpha
Helix 176	AT5	F	382	406	Right-handed alpha
Helix 177	AT6	F	413	442	Right-handed alpha
Helix 178	AT7	F	453	457	Right-handed 310
Helix 179	AT8	F	469	473	Right-handed 310

There are 12 sheets in PDB entry 6V0A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	264	265	first strand
Strand 2	A	272	273	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	304	305	first strand
Strand 2	A	312	313	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	264	265	first strand
Strand 2	B	272	273	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	304	305	first strand
Strand 2	B	312	313	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	264	265	first strand
Strand 2	C	272	273	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	304	305	first strand
Strand 2	C	312	313	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	264	266	first strand
Strand 2	D	271	273	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	304	305	first strand
Strand 2	D	312	313	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	264	265	first strand
Strand 2	E	272	273	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	304	305	first strand
Strand 2	E	312	313	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	264	266	first strand
Strand 2	F	271	273	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	304	305	first strand
Strand 2	F	312	313	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6V0A

Analysis of interatomic Contacts of Structural Units in PDB entry:
6V0A