Analysis of interatomic Contacts of Structural Units in PDB entry:
6V0M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6V0M entry

There are 3 chains in PDB entry 6V0M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1238GLU 1308
B
 GLY 1238GLU 1308
C
 GLY 1240GLN 1304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6V0M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1240 1251Right-handed alpha
Helix 2
AA2
A
1254 1264Right-handed alpha
Helix 3
AA3
A
1267 1274Right-handed alpha
Helix 4
AA4
A
1276 1283Right-handed alpha
Helix 5
AA5
A
1286 1308Right-handed alpha
Helix 6
AA6
B
1240 1251Right-handed alpha
Helix 7
AA7
B
1254 1264Right-handed alpha
Helix 8
AA8
B
1267 1274Right-handed alpha
Helix 9
AA9
B
1276 1283Right-handed alpha
Helix 10
AB1
B
1286 1308Right-handed alpha
Helix 11
AB2
C
1241 1251Right-handed alpha
Helix 12
AB3
C
1254 1265Right-handed alpha
Helix 13
AB4
C
1267 1274Right-handed alpha
Helix 14
AB5
C
1276 1283Right-handed alpha
Helix 15
AB6
C
1286 1304Right-handed alpha
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There are no sheets in PDB entry 6V0M
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il