Analysis of interatomic Contacts of Structural Units in PDB entry:
6V1Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6V1Q entry

There are 2 chains in PDB entry 6V1Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 34TYR 672
B
 MET 34TYR 672
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 6V1Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 46Right-handed alpha
Helix 2
AA2
A
63 70Right-handed alpha
Helix 3
AA3
A
71 88Right-handed alpha
Helix 4
AA4
A
89 91Right-handed 310
Helix 5
AA5
A
100 126Right-handed alpha
Helix 6
AA6
A
134 154Right-handed alpha
Helix 7
AA7
A
168 170Right-handed 310
Helix 8
AA8
A
171 179Right-handed alpha
Helix 9
AA9
A
182 220Right-handed alpha
Helix 10
AB1
A
237 250Right-handed alpha
Helix 11
AB2
A
265 267Right-handed 310
Helix 12
AB3
A
268 279Right-handed alpha
Helix 13
AB4
A
282 300Right-handed alpha
Helix 14
AB5
A
307 320Right-handed alpha
Helix 15
AB6
A
408 415Right-handed alpha
Helix 16
AB7
A
420 432Right-handed alpha
Helix 17
AB8
A
441 457Right-handed alpha
Helix 18
AB9
A
478 490Right-handed alpha
Helix 19
AC1
A
491 500Right-handed alpha
Helix 20
AC2
A
506 522Right-handed alpha
Helix 21
AC3
A
523 530Right-handed 310
Helix 22
AC4
A
543 568Right-handed alpha
Helix 23
AC5
A
580 584Right-handed 310
Helix 24
AC6
A
589 593Right-handed 310
Helix 25
AC7
A
609 622Right-handed alpha
Helix 26
AC8
A
625 634Right-handed alpha
Helix 27
AC9
A
638 640Right-handed 310
Helix 28
AD1
A
641 653Right-handed alpha
Helix 29
AD2
A
656 670Right-handed alpha
Helix 30
AD3
B
36 46Right-handed alpha
Helix 31
AD4
B
63 70Right-handed alpha
Helix 32
AD5
B
71 88Right-handed alpha
Helix 33
AD6
B
89 91Right-handed 310
Helix 34
AD7
B
100 126Right-handed alpha
Helix 35
AD8
B
134 154Right-handed alpha
Helix 36
AD9
B
168 170Right-handed 310
Helix 37
AE1
B
171 179Right-handed alpha
Helix 38
AE2
B
182 220Right-handed alpha
Helix 39
AE3
B
237 250Right-handed alpha
Helix 40
AE4
B
265 267Right-handed 310
Helix 41
AE5
B
268 279Right-handed alpha
Helix 42
AE6
B
282 300Right-handed alpha
Helix 43
AE7
B
307 320Right-handed alpha
Helix 44
AE8
B
408 415Right-handed alpha
Helix 45
AE9
B
420 432Right-handed alpha
Helix 46
AF1
B
441 457Right-handed alpha
Helix 47
AF2
B
478 490Right-handed alpha
Helix 48
AF3
B
491 500Right-handed alpha
Helix 49
AF4
B
506 522Right-handed alpha
Helix 50
AF5
B
523 530Right-handed 310
Helix 51
AF6
B
543 568Right-handed alpha
Helix 52
AF7
B
580 584Right-handed 310
Helix 53
AF8
B
589 593Right-handed 310
Helix 54
AF9
B
609 622Right-handed alpha
Helix 55
AG1
B
625 634Right-handed alpha
Helix 56
AG2
B
638 640Right-handed 310
Helix 57
AG3
B
641 653Right-handed alpha
Helix 58
AG4
B
656 670Right-handed alpha
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There are no sheets in PDB entry 6V1Q
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il