Analysis of interatomic Contacts of Structural Units in PDB entry:
6V22

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6V22 entry

There are 8 chains in PDB entry 6V22 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 16	ASP 1056
E	ALA 2007	LYS 2205
B	SER 16	ASP 1056
F	ALA 2007	LYS 2205
C	SER 16	ASP 1056
G	ALA 2007	LYS 2205
D	SER 16	ASP 1056
H	ALA 2007	LYS 2205

There are184 helices in PDB entry 6V22. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	21	47	Right-handed alpha
Helix 2	AA2	A	93	106	Right-handed alpha
Helix 3	AA3	A	109	134	Right-handed alpha
Helix 4	AA4	A	147	171	Right-handed alpha
Helix 5	AA5	A	173	179	Right-handed alpha
Helix 6	AA6	A	180	200	Right-handed alpha
Helix 7	AA7	A	206	215	Right-handed 310
Helix 8	AA8	A	216	223	Right-handed alpha
Helix 9	AA9	A	229	259	Right-handed alpha
Helix 10	AB1	A	261	265	Right-handed 310
Helix 11	AB2	A	273	286	Right-handed alpha
Helix 12	AB3	A	297	326	Right-handed alpha
Helix 13	AB4	A	352	364	Right-handed alpha
Helix 14	AB5	A	384	394	Right-handed alpha
Helix 15	AB6	A	407	414	Right-handed alpha
Helix 16	AB7	A	432	451	Right-handed alpha
Helix 17	AB8	A	463	471	Right-handed alpha
Helix 18	AB9	A	486	500	Right-handed alpha
Helix 19	AC1	A	502	510	Right-handed alpha
Helix 20	AC2	A	523	533	Right-handed alpha
Helix 21	AC3	A	542	546	Right-handed 310
Helix 22	AC4	A	549	560	Right-handed alpha
Helix 23	AC5	A	604	609	Right-handed 310
Helix 24	AC6	A	699	703	Right-handed 310
Helix 25	AC7	A	706	713	Right-handed alpha
Helix 26	AC8	A	734	739	Right-handed alpha
Helix 27	AC9	A	740	743	Right-handed 310
Helix 28	AD1	A	759	771	Right-handed alpha
Helix 29	AD2	A	785	792	Right-handed alpha
Helix 30	AD3	A	817	829	Right-handed alpha
Helix 31	AD4	A	884	891	Right-handed 310
Helix 32	AD5	A	902	905	Right-handed 310
Helix 33	AD6	A	906	911	Right-handed alpha
Helix 34	AD7	A	918	921	Right-handed 310
Helix 35	AD8	A	922	930	Right-handed alpha
Helix 36	AD9	A	931	942	Right-handed alpha
Helix 37	AE1	A	946	956	Right-handed alpha
Helix 38	AE2	A	965	971	Right-handed alpha
Helix 39	AE3	A	972	974	Right-handed 310
Helix 40	AE4	A	987	992	Right-handed 310
Helix 41	AE5	A	996	1007	Right-handed alpha
Helix 42	AE6	E	2011	2039	Right-handed alpha
Helix 43	AE7	E	2039	2049	Right-handed alpha
Helix 44	AE8	E	2103	2110	Right-handed alpha
Helix 45	AE9	E	2122	2140	Right-handed alpha
Helix 46	AF1	E	2168	2204	Right-handed alpha
Helix 47	AF2	B	21	47	Right-handed alpha
Helix 48	AF3	B	93	106	Right-handed alpha
Helix 49	AF4	B	109	134	Right-handed alpha
Helix 50	AF5	B	147	171	Right-handed alpha
Helix 51	AF6	B	173	179	Right-handed alpha
Helix 52	AF7	B	180	200	Right-handed alpha
Helix 53	AF8	B	206	215	Right-handed 310
Helix 54	AF9	B	216	223	Right-handed alpha
Helix 55	AG1	B	229	259	Right-handed alpha
Helix 56	AG2	B	261	265	Right-handed 310
Helix 57	AG3	B	273	286	Right-handed alpha
Helix 58	AG4	B	297	326	Right-handed alpha
Helix 59	AG5	B	352	364	Right-handed alpha
Helix 60	AG6	B	384	394	Right-handed alpha
Helix 61	AG7	B	407	414	Right-handed alpha
Helix 62	AG8	B	432	451	Right-handed alpha
Helix 63	AG9	B	463	471	Right-handed alpha
Helix 64	AH1	B	486	500	Right-handed alpha
Helix 65	AH2	B	502	510	Right-handed alpha
Helix 66	AH3	B	523	533	Right-handed alpha
Helix 67	AH4	B	542	546	Right-handed 310
Helix 68	AH5	B	549	560	Right-handed alpha
Helix 69	AH6	B	604	609	Right-handed 310
Helix 70	AH7	B	699	703	Right-handed 310
Helix 71	AH8	B	706	713	Right-handed alpha
Helix 72	AH9	B	734	739	Right-handed alpha
Helix 73	AI1	B	740	743	Right-handed 310
Helix 74	AI2	B	759	771	Right-handed alpha
Helix 75	AI3	B	785	792	Right-handed alpha
Helix 76	AI4	B	817	829	Right-handed alpha
Helix 77	AI5	B	884	891	Right-handed 310
Helix 78	AI6	B	902	905	Right-handed 310
Helix 79	AI7	B	906	911	Right-handed alpha
Helix 80	AI8	B	918	921	Right-handed 310
Helix 81	AI9	B	922	930	Right-handed alpha
Helix 82	AJ1	B	931	942	Right-handed alpha
Helix 83	AJ2	B	946	956	Right-handed alpha
Helix 84	AJ3	B	965	971	Right-handed alpha
Helix 85	AJ4	B	972	974	Right-handed 310
Helix 86	AJ5	B	987	992	Right-handed 310
Helix 87	AJ6	B	996	1007	Right-handed alpha
Helix 88	AJ7	F	2011	2039	Right-handed alpha
Helix 89	AJ8	F	2039	2049	Right-handed alpha
Helix 90	AJ9	F	2103	2110	Right-handed alpha
Helix 91	AK1	F	2122	2140	Right-handed alpha
Helix 92	AK2	F	2168	2204	Right-handed alpha
Helix 93	AK3	C	21	47	Right-handed alpha
Helix 94	AK4	C	93	106	Right-handed alpha
Helix 95	AK5	C	109	134	Right-handed alpha
Helix 96	AK6	C	147	171	Right-handed alpha
Helix 97	AK7	C	173	179	Right-handed alpha
Helix 98	AK8	C	180	200	Right-handed alpha
Helix 99	AK9	C	206	215	Right-handed 310
Helix 100	AL1	C	216	223	Right-handed alpha
Helix 101	AL2	C	229	259	Right-handed alpha
Helix 102	AL3	C	261	265	Right-handed 310
Helix 103	AL4	C	273	286	Right-handed alpha
Helix 104	AL5	C	297	326	Right-handed alpha
Helix 105	AL6	C	352	364	Right-handed alpha
Helix 106	AL7	C	384	394	Right-handed alpha
Helix 107	AL8	C	407	414	Right-handed alpha
Helix 108	AL9	C	432	451	Right-handed alpha
Helix 109	AM1	C	463	471	Right-handed alpha
Helix 110	AM2	C	486	500	Right-handed alpha
Helix 111	AM3	C	502	510	Right-handed alpha
Helix 112	AM4	C	523	533	Right-handed alpha
Helix 113	AM5	C	542	546	Right-handed 310
Helix 114	AM6	C	549	560	Right-handed alpha
Helix 115	AM7	C	604	609	Right-handed 310
Helix 116	AM8	C	699	703	Right-handed 310
Helix 117	AM9	C	706	713	Right-handed alpha
Helix 118	AN1	C	734	739	Right-handed alpha
Helix 119	AN2	C	740	743	Right-handed 310
Helix 120	AN3	C	759	771	Right-handed alpha
Helix 121	AN4	C	785	792	Right-handed alpha
Helix 122	AN5	C	817	829	Right-handed alpha
Helix 123	AN6	C	884	891	Right-handed 310
Helix 124	AN7	C	902	905	Right-handed 310
Helix 125	AN8	C	906	911	Right-handed alpha
Helix 126	AN9	C	918	921	Right-handed 310
Helix 127	AO1	C	922	930	Right-handed alpha
Helix 128	AO2	C	931	942	Right-handed alpha
Helix 129	AO3	C	946	956	Right-handed alpha
Helix 130	AO4	C	965	971	Right-handed alpha
Helix 131	AO5	C	972	974	Right-handed 310
Helix 132	AO6	C	987	992	Right-handed 310
Helix 133	AO7	C	996	1007	Right-handed alpha
Helix 134	AO8	G	2011	2039	Right-handed alpha
Helix 135	AO9	G	2039	2049	Right-handed alpha
Helix 136	AP1	G	2103	2110	Right-handed alpha
Helix 137	AP2	G	2122	2140	Right-handed alpha
Helix 138	AP3	G	2168	2204	Right-handed alpha
Helix 139	AP4	D	21	47	Right-handed alpha
Helix 140	AP5	D	93	106	Right-handed alpha
Helix 141	AP6	D	109	134	Right-handed alpha
Helix 142	AP7	D	147	171	Right-handed alpha
Helix 143	AP8	D	173	179	Right-handed alpha
Helix 144	AP9	D	180	200	Right-handed alpha
Helix 145	AQ1	D	206	215	Right-handed 310
Helix 146	AQ2	D	216	223	Right-handed alpha
Helix 147	AQ3	D	229	259	Right-handed alpha
Helix 148	AQ4	D	261	265	Right-handed 310
Helix 149	AQ5	D	273	286	Right-handed alpha
Helix 150	AQ6	D	297	326	Right-handed alpha
Helix 151	AQ7	D	352	364	Right-handed alpha
Helix 152	AQ8	D	384	394	Right-handed alpha
Helix 153	AQ9	D	407	414	Right-handed alpha
Helix 154	AR1	D	432	451	Right-handed alpha
Helix 155	AR2	D	463	471	Right-handed alpha
Helix 156	AR3	D	486	500	Right-handed alpha
Helix 157	AR4	D	502	510	Right-handed alpha
Helix 158	AR5	D	523	533	Right-handed alpha
Helix 159	AR6	D	542	546	Right-handed 310
Helix 160	AR7	D	549	560	Right-handed alpha
Helix 161	AR8	D	604	609	Right-handed 310
Helix 162	AR9	D	699	703	Right-handed 310
Helix 163	AS1	D	706	713	Right-handed alpha
Helix 164	AS2	D	734	739	Right-handed alpha
Helix 165	AS3	D	740	743	Right-handed 310
Helix 166	AS4	D	759	771	Right-handed alpha
Helix 167	AS5	D	785	792	Right-handed alpha
Helix 168	AS6	D	817	829	Right-handed alpha
Helix 169	AS7	D	884	891	Right-handed 310
Helix 170	AS8	D	902	905	Right-handed 310
Helix 171	AS9	D	906	911	Right-handed alpha
Helix 172	AT1	D	918	921	Right-handed 310
Helix 173	AT2	D	922	930	Right-handed alpha
Helix 174	AT3	D	931	942	Right-handed alpha
Helix 175	AT4	D	946	956	Right-handed alpha
Helix 176	AT5	D	965	971	Right-handed alpha
Helix 177	AT6	D	972	974	Right-handed 310
Helix 178	AT7	D	987	992	Right-handed 310
Helix 179	AT8	D	996	1007	Right-handed alpha
Helix 180	AT9	H	2011	2039	Right-handed alpha
Helix 181	AU1	H	2039	2049	Right-handed alpha
Helix 182	AU2	H	2103	2110	Right-handed alpha
Helix 183	AU3	H	2122	2140	Right-handed alpha
Helix 184	AU4	H	2168	2204	Right-handed alpha

There are 36 sheets in PDB entry 6V22. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	139	141	first strand
Strand 2	A	201	203	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	398	402	first strand
Strand 2	A	374	379	parallel
Strand 3	A	344	349	parallel
Strand 4	A	421	425	parallel
Strand 5	A	456	460	parallel
Strand 6	A	482	485	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	540	first strand
Strand 2	A	594	599	anti-parallel
Strand 3	A	564	569	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	686	687	first strand
Strand 2	A	961	962	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	776	780	first strand
Strand 2	A	754	758	parallel
Strand 3	A	719	724	parallel
Strand 4	A	799	804	parallel
Strand 5	A	878	882	parallel
Strand 6	A	914	916	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	976	981	first strand
Strand 2	A	1048	1053	anti-parallel
Strand 3	A	1010	1014	anti-parallel
Strand 4	A	1034	1035	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	994	995	first strand
Strand 2	A	1042	1043	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2050	2061	first strand
Strand 2	E	2085	2091	anti-parallel
Strand 3	E	2097	2101	anti-parallel
Strand 4	E	2155	2160	parallel
Strand 5	E	2146	2151	anti-parallel
Strand 6	E	2050	2061	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2066	2067	first strand
Strand 2	E	2081	2082	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	139	141	first strand
Strand 2	B	201	203	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	398	402	first strand
Strand 2	B	374	379	parallel
Strand 3	B	344	349	parallel
Strand 4	B	421	425	parallel
Strand 5	B	456	460	parallel
Strand 6	B	482	485	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	535	540	first strand
Strand 2	B	594	599	anti-parallel
Strand 3	B	564	569	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	686	687	first strand
Strand 2	B	961	962	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	776	780	first strand
Strand 2	B	754	758	parallel
Strand 3	B	719	724	parallel
Strand 4	B	799	804	parallel
Strand 5	B	878	882	parallel
Strand 6	B	914	916	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	976	981	first strand
Strand 2	B	1048	1053	anti-parallel
Strand 3	B	1010	1014	anti-parallel
Strand 4	B	1034	1035	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	994	995	first strand
Strand 2	B	1042	1043	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2050	2061	first strand
Strand 2	F	2085	2091	anti-parallel
Strand 3	F	2097	2101	anti-parallel
Strand 4	F	2155	2160	parallel
Strand 5	F	2146	2151	anti-parallel
Strand 6	F	2050	2061	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2066	2067	first strand
Strand 2	F	2081	2082	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	139	141	first strand
Strand 2	C	201	203	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	398	402	first strand
Strand 2	C	374	379	parallel
Strand 3	C	344	349	parallel
Strand 4	C	421	425	parallel
Strand 5	C	456	460	parallel
Strand 6	C	482	485	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	535	540	first strand
Strand 2	C	594	599	anti-parallel
Strand 3	C	564	569	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	686	687	first strand
Strand 2	C	961	962	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	776	780	first strand
Strand 2	C	754	758	parallel
Strand 3	C	719	724	parallel
Strand 4	C	799	804	parallel
Strand 5	C	878	882	parallel
Strand 6	C	914	916	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	976	981	first strand
Strand 2	C	1048	1053	anti-parallel
Strand 3	C	1010	1014	anti-parallel
Strand 4	C	1034	1035	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	994	995	first strand
Strand 2	C	1042	1043	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	2050	2061	first strand
Strand 2	G	2085	2091	anti-parallel
Strand 3	G	2097	2101	anti-parallel
Strand 4	G	2155	2160	parallel
Strand 5	G	2146	2151	anti-parallel
Strand 6	G	2050	2061	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	2066	2067	first strand
Strand 2	G	2081	2082	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	139	141	first strand
Strand 2	D	201	203	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	398	402	first strand
Strand 2	D	374	379	parallel
Strand 3	D	344	349	parallel
Strand 4	D	421	425	parallel
Strand 5	D	456	460	parallel
Strand 6	D	482	485	parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	535	540	first strand
Strand 2	D	594	599	anti-parallel
Strand 3	D	564	569	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	686	687	first strand
Strand 2	D	961	962	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	776	780	first strand
Strand 2	D	754	758	parallel
Strand 3	D	719	724	parallel
Strand 4	D	799	804	parallel
Strand 5	D	878	882	parallel
Strand 6	D	914	916	parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	976	981	first strand
Strand 2	D	1048	1053	anti-parallel
Strand 3	D	1010	1014	anti-parallel
Strand 4	D	1034	1035	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	994	995	first strand
Strand 2	D	1042	1043	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	2050	2061	first strand
Strand 2	H	2085	2091	anti-parallel
Strand 3	H	2097	2101	anti-parallel
Strand 4	H	2155	2160	parallel
Strand 5	H	2146	2151	anti-parallel
Strand 6	H	2050	2061	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	2066	2067	first strand
Strand 2	H	2081	2082	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6V22

Analysis of interatomic Contacts of Structural Units in PDB entry:
6V22