Analysis of interatomic Contacts of Structural Units in PDB entry:
6V2E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6V2E entry

There are 2 chains in PDB entry 6V2E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3VAL 2129
B
 ASP 37TYR 52
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6V2E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 34Right-handed alpha
Helix 2
AA2
A
44 54Right-handed alpha
Helix 3
AA3
A
68 75Right-handed alpha
Helix 4
AA4
A
84 90Right-handed alpha
Helix 5
AA5
A
92 99Right-handed alpha
Helix 6
AA6
A
130 132Right-handed 310
Helix 7
AA7
A
133 143Right-handed alpha
Helix 8
AA8
A
155 158Right-handed 310
Helix 9
AA9
A
159 166Right-handed alpha
Helix 10
AB1
A
187 203Right-handed alpha
Helix 11
AB2
A
211 221Right-handed alpha
Helix 12
AB3
A
230 232Right-handed 310
Helix 13
AB4
A
233 241Right-handed alpha
Helix 14
AB5
A
274 285Right-handed alpha
Helix 15
AB6
A
288 299Right-handed alpha
Helix 16
AB7
A
306 314Right-handed alpha
Helix 17
AB8
A
316 329Right-handed alpha
Helix 18
AB9
A
337 354Right-handed alpha
Helix 19
AC1
A
358 1055Right-handed alpha
Helix 20
AC2
A
1060 1077Right-handed alpha
Helix 21
AC3
A
1078 1083Right-handed 310
Helix 22
AC4
A
1085 1107Right-handed alpha
Helix 23
AC5
A
1113 1127Right-handed alpha
Helix 24
AC6
A
2035 2051Right-handed alpha
Helix 25
AC7
A
2052 2055Right-handed 310
Helix 26
AC8
B
43 48Right-handed alpha
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There are 8 sheets in PDB entry 6V2E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 40first strand
Strand 2
A
9 12parallel
Strand 3
A
61 65parallel
Strand 4
A
260 268anti-parallel
Strand 5
A
108 113anti-parallel
Strand 6
A
303 304anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 40first strand
Strand 2
A
9 12parallel
Strand 3
A
61 65parallel
Strand 4
A
260 268anti-parallel
Strand 5
A
330 331parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
104 105anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 149first strand
Strand 2
A
224 229parallel
Strand 3
A
116 120anti-parallel
Strand 4
A
244 247anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 174first strand
Strand 2
A
177 184anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2064 2065first strand
Strand 2
A
2078 2079anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2068 2069first strand
Strand 2
A
2074 2075anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2082 2087first strand
Strand 2
A
2100 2105anti-parallel
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