Analysis of interatomic Contacts of Structural Units in PDB entry:
6V2N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6V2N entry

There is 1 chain in PDB entry 6V2N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 6LEU 540
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6V2N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 14Right-handed alpha
Helix 2
AA2
A
28 37Right-handed alpha
Helix 3
AA3
A
42 46Right-handed 310
Helix 4
AA4
A
66 68Right-handed 310
Helix 5
AA5
A
98 113Right-handed alpha
Helix 6
AA6
A
141 152Right-handed alpha
Helix 7
AA7
A
156 162Right-handed alpha
Helix 8
AA8
A
208 223Right-handed alpha
Helix 9
AA9
A
224 227Right-handed 310
Helix 10
AB1
A
297 303Right-handed alpha
Helix 11
AB2
A
339 341Right-handed 310
Helix 12
AB3
A
375 386Right-handed alpha
Helix 13
AB4
A
407 414Right-handed 310
Helix 14
AB5
A
417 433Right-handed alpha
Helix 15
AB6
A
451 464Right-handed alpha
Helix 16
AB7
A
490 494Right-handed 310
Helix 17
AB8
A
495 500Right-handed 310
Helix 18
AB9
A
502 522Right-handed alpha
Helix 19
AC1
A
523 525Right-handed 310
Helix 20
AC2
A
527 534Right-handed alpha
Helix 21
AC3
A
535 537Right-handed 310
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There are 7 sheets in PDB entry 6V2N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 25first strand
Strand 2
A
117 125parallel
Strand 3
A
133 139anti-parallel
Strand 4
A
167 172parallel
Strand 5
A
199 203parallel
Strand 6
A
190 194anti-parallel
Strand 7
A
70 73parallel
Strand 8
A
95 97parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
55 57anti-parallel
Strand 3
A
309 311parallel
Strand 4
A
333 337anti-parallel
Strand 5
A
284 288anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 232first strand
Strand 2
A
270 274anti-parallel
Strand 3
A
277 280anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 267first strand
Strand 2
A
234 237anti-parallel
Strand 3
A
243 247anti-parallel
Strand 4
A
354 361parallel
Strand 5
A
435 440parallel
Strand 6
A
371 373anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 315first strand
Strand 2
A
321 322anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 388first strand
Strand 2
A
404 405anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
472 475first strand
Strand 2
A
480 483anti-parallel
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