Analysis of interatomic Contacts of Structural Units in PDB entry:
6V3G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6V3G entry

There are 4 chains in PDB entry 6V3G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ARG 20	ASP 1056
A	ARG 20	ASP 1056
C	ARG 20	ASP 1056
D	ARG 20	ASP 1056

There are176 helices in PDB entry 6V3G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	22	34	Right-handed alpha
Helix 2	AA2	B	94	98	Right-handed alpha
Helix 3	AA3	B	101	106	Right-handed alpha
Helix 4	AA4	B	109	134	Right-handed alpha
Helix 5	AA5	B	147	165	Right-handed alpha
Helix 6	AA6	B	166	171	Right-handed alpha
Helix 7	AA7	B	175	179	Right-handed 310
Helix 8	AA8	B	180	188	Right-handed alpha
Helix 9	AA9	B	189	200	Right-handed alpha
Helix 10	AB1	B	206	215	Right-handed 310
Helix 11	AB2	B	216	224	Right-handed alpha
Helix 12	AB3	B	229	259	Right-handed alpha
Helix 13	AB4	B	273	285	Right-handed alpha
Helix 14	AB5	B	297	318	Right-handed alpha
Helix 15	AB6	B	319	326	Right-handed alpha
Helix 16	AB7	B	352	364	Right-handed alpha
Helix 17	AB8	B	384	394	Right-handed alpha
Helix 18	AB9	B	407	414	Right-handed alpha
Helix 19	AC1	B	432	451	Right-handed alpha
Helix 20	AC2	B	465	469	Right-handed 310
Helix 21	AC3	B	486	500	Right-handed alpha
Helix 22	AC4	B	502	510	Right-handed alpha
Helix 23	AC5	B	523	533	Right-handed alpha
Helix 24	AC6	B	542	546	Right-handed 310
Helix 25	AC7	B	549	560	Right-handed alpha
Helix 26	AC8	B	601	607	Right-handed alpha
Helix 27	AC9	B	608	610	Right-handed 310
Helix 28	AD1	B	621	626	Right-handed alpha
Helix 29	AD2	B	706	713	Right-handed alpha
Helix 30	AD3	B	734	739	Right-handed alpha
Helix 31	AD4	B	740	742	Right-handed 310
Helix 32	AD5	B	759	764	Right-handed alpha
Helix 33	AD6	B	765	770	Right-handed 310
Helix 34	AD7	B	785	792	Right-handed alpha
Helix 35	AD8	B	813	816	Right-handed 310
Helix 36	AD9	B	817	830	Right-handed alpha
Helix 37	AE1	B	872	876	Right-handed 310
Helix 38	AE2	B	884	888	Right-handed 310
Helix 39	AE3	B	906	912	Right-handed alpha
Helix 40	AE4	B	919	930	Right-handed alpha
Helix 41	AE5	B	932	942	Right-handed alpha
Helix 42	AE6	B	946	954	Right-handed alpha
Helix 43	AE7	B	995	1008	Right-handed alpha
Helix 44	AE8	B	1017	1021	Right-handed 310
Helix 45	AE9	A	22	34	Right-handed alpha
Helix 46	AF1	A	94	98	Right-handed alpha
Helix 47	AF2	A	101	106	Right-handed alpha
Helix 48	AF3	A	109	134	Right-handed alpha
Helix 49	AF4	A	147	165	Right-handed alpha
Helix 50	AF5	A	166	171	Right-handed alpha
Helix 51	AF6	A	175	179	Right-handed 310
Helix 52	AF7	A	180	188	Right-handed alpha
Helix 53	AF8	A	189	200	Right-handed alpha
Helix 54	AF9	A	206	215	Right-handed 310
Helix 55	AG1	A	216	224	Right-handed alpha
Helix 56	AG2	A	229	259	Right-handed alpha
Helix 57	AG3	A	273	285	Right-handed alpha
Helix 58	AG4	A	297	318	Right-handed alpha
Helix 59	AG5	A	319	326	Right-handed alpha
Helix 60	AG6	A	352	364	Right-handed alpha
Helix 61	AG7	A	384	394	Right-handed alpha
Helix 62	AG8	A	407	414	Right-handed alpha
Helix 63	AG9	A	432	451	Right-handed alpha
Helix 64	AH1	A	465	469	Right-handed 310
Helix 65	AH2	A	486	500	Right-handed alpha
Helix 66	AH3	A	502	510	Right-handed alpha
Helix 67	AH4	A	523	533	Right-handed alpha
Helix 68	AH5	A	542	546	Right-handed 310
Helix 69	AH6	A	549	560	Right-handed alpha
Helix 70	AH7	A	601	607	Right-handed alpha
Helix 71	AH8	A	608	610	Right-handed 310
Helix 72	AH9	A	621	626	Right-handed alpha
Helix 73	AI1	A	706	713	Right-handed alpha
Helix 74	AI2	A	734	739	Right-handed alpha
Helix 75	AI3	A	740	742	Right-handed 310
Helix 76	AI4	A	759	764	Right-handed alpha
Helix 77	AI5	A	765	770	Right-handed 310
Helix 78	AI6	A	785	792	Right-handed alpha
Helix 79	AI7	A	813	816	Right-handed 310
Helix 80	AI8	A	817	830	Right-handed alpha
Helix 81	AI9	A	872	876	Right-handed 310
Helix 82	AJ1	A	884	888	Right-handed 310
Helix 83	AJ2	A	906	912	Right-handed alpha
Helix 84	AJ3	A	919	930	Right-handed alpha
Helix 85	AJ4	A	932	942	Right-handed alpha
Helix 86	AJ5	A	946	954	Right-handed alpha
Helix 87	AJ6	A	995	1008	Right-handed alpha
Helix 88	AJ7	A	1017	1021	Right-handed 310
Helix 89	AJ8	C	22	34	Right-handed alpha
Helix 90	AJ9	C	94	98	Right-handed alpha
Helix 91	AK1	C	101	106	Right-handed alpha
Helix 92	AK2	C	109	134	Right-handed alpha
Helix 93	AK3	C	147	165	Right-handed alpha
Helix 94	AK4	C	166	171	Right-handed alpha
Helix 95	AK5	C	175	179	Right-handed 310
Helix 96	AK6	C	180	188	Right-handed alpha
Helix 97	AK7	C	189	200	Right-handed alpha
Helix 98	AK8	C	206	215	Right-handed 310
Helix 99	AK9	C	216	224	Right-handed alpha
Helix 100	AL1	C	229	259	Right-handed alpha
Helix 101	AL2	C	273	285	Right-handed alpha
Helix 102	AL3	C	297	318	Right-handed alpha
Helix 103	AL4	C	319	326	Right-handed alpha
Helix 104	AL5	C	352	364	Right-handed alpha
Helix 105	AL6	C	384	394	Right-handed alpha
Helix 106	AL7	C	407	414	Right-handed alpha
Helix 107	AL8	C	432	451	Right-handed alpha
Helix 108	AL9	C	465	469	Right-handed 310
Helix 109	AM1	C	486	500	Right-handed alpha
Helix 110	AM2	C	502	510	Right-handed alpha
Helix 111	AM3	C	523	533	Right-handed alpha
Helix 112	AM4	C	542	546	Right-handed 310
Helix 113	AM5	C	549	560	Right-handed alpha
Helix 114	AM6	C	601	607	Right-handed alpha
Helix 115	AM7	C	608	610	Right-handed 310
Helix 116	AM8	C	621	626	Right-handed alpha
Helix 117	AM9	C	706	713	Right-handed alpha
Helix 118	AN1	C	734	739	Right-handed alpha
Helix 119	AN2	C	740	742	Right-handed 310
Helix 120	AN3	C	759	764	Right-handed alpha
Helix 121	AN4	C	765	770	Right-handed 310
Helix 122	AN5	C	785	792	Right-handed alpha
Helix 123	AN6	C	813	816	Right-handed 310
Helix 124	AN7	C	817	830	Right-handed alpha
Helix 125	AN8	C	872	876	Right-handed 310
Helix 126	AN9	C	884	888	Right-handed 310
Helix 127	AO1	C	906	912	Right-handed alpha
Helix 128	AO2	C	919	930	Right-handed alpha
Helix 129	AO3	C	932	942	Right-handed alpha
Helix 130	AO4	C	946	954	Right-handed alpha
Helix 131	AO5	C	995	1008	Right-handed alpha
Helix 132	AO6	C	1017	1021	Right-handed 310
Helix 133	AO7	D	22	34	Right-handed alpha
Helix 134	AO8	D	94	98	Right-handed alpha
Helix 135	AO9	D	101	106	Right-handed alpha
Helix 136	AP1	D	109	134	Right-handed alpha
Helix 137	AP2	D	147	165	Right-handed alpha
Helix 138	AP3	D	166	171	Right-handed alpha
Helix 139	AP4	D	175	179	Right-handed 310
Helix 140	AP5	D	180	188	Right-handed alpha
Helix 141	AP6	D	189	200	Right-handed alpha
Helix 142	AP7	D	206	215	Right-handed 310
Helix 143	AP8	D	216	224	Right-handed alpha
Helix 144	AP9	D	229	259	Right-handed alpha
Helix 145	AQ1	D	273	285	Right-handed alpha
Helix 146	AQ2	D	297	318	Right-handed alpha
Helix 147	AQ3	D	319	326	Right-handed alpha
Helix 148	AQ4	D	352	364	Right-handed alpha
Helix 149	AQ5	D	384	394	Right-handed alpha
Helix 150	AQ6	D	407	414	Right-handed alpha
Helix 151	AQ7	D	432	451	Right-handed alpha
Helix 152	AQ8	D	465	469	Right-handed 310
Helix 153	AQ9	D	486	500	Right-handed alpha
Helix 154	AR1	D	502	510	Right-handed alpha
Helix 155	AR2	D	523	533	Right-handed alpha
Helix 156	AR3	D	542	546	Right-handed 310
Helix 157	AR4	D	549	560	Right-handed alpha
Helix 158	AR5	D	601	607	Right-handed alpha
Helix 159	AR6	D	608	610	Right-handed 310
Helix 160	AR7	D	621	626	Right-handed alpha
Helix 161	AR8	D	706	713	Right-handed alpha
Helix 162	AR9	D	734	739	Right-handed alpha
Helix 163	AS1	D	740	742	Right-handed 310
Helix 164	AS2	D	759	764	Right-handed alpha
Helix 165	AS3	D	765	770	Right-handed 310
Helix 166	AS4	D	785	792	Right-handed alpha
Helix 167	AS5	D	813	816	Right-handed 310
Helix 168	AS6	D	817	830	Right-handed alpha
Helix 169	AS7	D	872	876	Right-handed 310
Helix 170	AS8	D	884	888	Right-handed 310
Helix 171	AS9	D	906	912	Right-handed alpha
Helix 172	AT1	D	919	930	Right-handed alpha
Helix 173	AT2	D	932	942	Right-handed alpha
Helix 174	AT3	D	946	954	Right-handed alpha
Helix 175	AT4	D	995	1008	Right-handed alpha
Helix 176	AT5	D	1017	1021	Right-handed 310

There are 20 sheets in PDB entry 6V3G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	139	141	first strand
Strand 2	B	201	203	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	398	401	first strand
Strand 2	B	375	378	parallel
Strand 3	B	346	349	parallel
Strand 4	B	421	425	parallel
Strand 5	B	455	460	parallel
Strand 6	B	482	485	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	535	540	first strand
Strand 2	B	594	599	anti-parallel
Strand 3	B	564	570	anti-parallel
Strand 4	B	578	581	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	776	780	first strand
Strand 2	B	754	758	parallel
Strand 3	B	719	723	parallel
Strand 4	B	800	803	parallel
Strand 5	B	878	882	parallel
Strand 6	B	914	916	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	976	980	first strand
Strand 2	B	1049	1053	anti-parallel
Strand 3	B	1010	1014	anti-parallel
Strand 4	B	1034	1035	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	139	141	first strand
Strand 2	A	201	203	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	398	401	first strand
Strand 2	A	375	378	parallel
Strand 3	A	346	349	parallel
Strand 4	A	421	425	parallel
Strand 5	A	455	460	parallel
Strand 6	A	482	485	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	540	first strand
Strand 2	A	594	599	anti-parallel
Strand 3	A	564	570	anti-parallel
Strand 4	A	578	581	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	776	780	first strand
Strand 2	A	754	758	parallel
Strand 3	A	719	723	parallel
Strand 4	A	800	803	parallel
Strand 5	A	878	882	parallel
Strand 6	A	914	916	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	976	980	first strand
Strand 2	A	1049	1053	anti-parallel
Strand 3	A	1010	1014	anti-parallel
Strand 4	A	1034	1035	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	139	141	first strand
Strand 2	C	201	203	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	398	401	first strand
Strand 2	C	375	378	parallel
Strand 3	C	346	349	parallel
Strand 4	C	421	425	parallel
Strand 5	C	455	460	parallel
Strand 6	C	482	485	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	535	540	first strand
Strand 2	C	594	599	anti-parallel
Strand 3	C	564	570	anti-parallel
Strand 4	C	578	581	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	776	780	first strand
Strand 2	C	754	758	parallel
Strand 3	C	719	723	parallel
Strand 4	C	800	803	parallel
Strand 5	C	878	882	parallel
Strand 6	C	914	916	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	976	980	first strand
Strand 2	C	1049	1053	anti-parallel
Strand 3	C	1010	1014	anti-parallel
Strand 4	C	1034	1035	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	139	141	first strand
Strand 2	D	201	203	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	398	401	first strand
Strand 2	D	375	378	parallel
Strand 3	D	346	349	parallel
Strand 4	D	421	425	parallel
Strand 5	D	455	460	parallel
Strand 6	D	482	485	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	535	540	first strand
Strand 2	D	594	599	anti-parallel
Strand 3	D	564	570	anti-parallel
Strand 4	D	578	581	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	776	780	first strand
Strand 2	D	754	758	parallel
Strand 3	D	719	723	parallel
Strand 4	D	800	803	parallel
Strand 5	D	878	882	parallel
Strand 6	D	914	916	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	976	980	first strand
Strand 2	D	1049	1053	anti-parallel
Strand 3	D	1010	1014	anti-parallel
Strand 4	D	1034	1035	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6V3G

Analysis of interatomic Contacts of Structural Units in PDB entry:
6V3G