Analysis of interatomic Contacts of Structural Units in PDB entry:
6V69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6V69 entry

There are 2 chains in PDB entry 6V69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
J
 ASP 260SER 1016
I
 MET 1GLN 656
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 6V69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
J
267 280Right-handed alpha
Helix 2
AA2
J
308 336Right-handed alpha
Helix 3
AA3
J
360 388Right-handed alpha
Helix 4
AA4
J
394 402Right-handed alpha
Helix 5
AA5
J
402 416Right-handed alpha
Helix 6
AA6
J
417 420Right-handed 310
Helix 7
AA7
J
428 446Right-handed alpha
Helix 8
AA8
J
456 482Right-handed alpha
Helix 9
AA9
J
552 571Right-handed alpha
Helix 10
AB1
J
638 648Right-handed alpha
Helix 11
AB2
J
687 690Right-handed 310
Helix 12
AB3
J
691 710Right-handed alpha
Helix 13
AB4
J
716 724Right-handed alpha
Helix 14
AB5
J
734 744Right-handed alpha
Helix 15
AB6
J
756 764Right-handed alpha
Helix 16
AB7
J
806 811Right-handed alpha
Helix 17
AB8
J
814 838Right-handed alpha
Helix 18
AB9
J
881 902Right-handed alpha
Helix 19
AC1
J
907 918Right-handed alpha
Helix 20
AC2
J
922 941Right-handed alpha
Helix 21
AC3
J
950 967Right-handed alpha
Helix 22
AC4
J
980 999Right-handed alpha
Helix 23
AC5
J
1000 1001Right-handed 310
Helix 24
AC6
J
1007 1013Right-handed 310
Helix 25
AC7
I
2 9Right-handed alpha
Helix 26
AC8
I
38 62Right-handed alpha
Helix 27
AC9
I
83 114Right-handed alpha
Helix 28
AD1
I
118 126Right-handed alpha
Helix 29
AD2
I
128 147Right-handed alpha
Helix 30
AD3
I
149 151Right-handed 310
Helix 31
AD4
I
152 160Right-handed alpha
Helix 32
AD5
I
165 194Right-handed alpha
Helix 33
AD6
I
269 285Right-handed alpha
Helix 34
AD7
I
302 317Right-handed alpha
Helix 35
AD8
I
321 346Right-handed alpha
Helix 36
AD9
I
349 361Right-handed alpha
Helix 37
AE1
I
365 376Right-handed alpha
Helix 38
AE2
I
377 382Right-handed alpha
Helix 39
AE3
I
387 403Right-handed alpha
Helix 40
AE4
I
447 450Right-handed 310
Helix 41
AE5
I
460 464Right-handed 310
Helix 42
AE6
I
469 499Right-handed alpha
Helix 43
AE7
I
500 502Right-handed 310
Helix 44
AE8
I
512 530Right-handed alpha
Helix 45
AE9
I
535 548Right-handed alpha
Helix 46
AF1
I
553 571Right-handed alpha
Helix 47
AF2
I
575 598Right-handed alpha
Helix 48
AF3
I
606 630Right-handed alpha
Helix 49
AF4
I
639 648Right-handed alpha
Helix 50
AF5
I
651 656Right-handed alpha
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There are 2 sheets in PDB entry 6V69. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
17 18first strand
Strand 2
I
26 27anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
414 418first strand
Strand 2
I
452 456anti-parallel
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