Analysis of interatomic Contacts of Structural Units in PDB entry:
6V6B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6V6B entry

There are 2 chains in PDB entry 6V6B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ILE 245ALA 888
C
 LEU 232GLU 895
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 6V6B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
246 258Right-handed alpha
Helix 2
AA2
B
284 296Right-handed alpha
Helix 3
AA3
B
297 311Right-handed alpha
Helix 4
AA4
B
319 326Right-handed alpha
Helix 5
AA5
B
329 345Right-handed alpha
Helix 6
AA6
B
363 371Right-handed alpha
Helix 7
AA7
B
376 388Right-handed alpha
Helix 8
AA8
B
393 398Right-handed alpha
Helix 9
AA9
B
414 434Right-handed alpha
Helix 10
AB1
B
479 495Right-handed alpha
Helix 11
AB2
B
528 552Right-handed alpha
Helix 12
AB3
B
554 565Right-handed alpha
Helix 13
AB4
B
571 581Right-handed alpha
Helix 14
AB5
B
581 586Right-handed alpha
Helix 15
AB6
B
588 592Right-handed 310
Helix 16
AB7
B
593 608Right-handed alpha
Helix 17
AB8
B
609 612Right-handed 310
Helix 18
AB9
B
614 621Right-handed alpha
Helix 19
AC1
B
633 637Right-handed alpha
Helix 20
AC2
B
648 653Right-handed alpha
Helix 21
AC3
B
655 676Right-handed alpha
Helix 22
AC4
B
676 688Right-handed alpha
Helix 23
AC5
B
697 725Right-handed alpha
Helix 24
AC6
B
726 731Right-handed alpha
Helix 25
AC7
B
731 736Right-handed alpha
Helix 26
AC8
B
744 762Right-handed alpha
Helix 27
AC9
B
768 809Right-handed alpha
Helix 28
AD1
B
826 839Right-handed alpha
Helix 29
AD2
B
839 866Right-handed alpha
Helix 30
AD3
B
873 881Right-handed alpha
Helix 31
AD4
B
882 885Right-handed 310
Helix 32
AD5
C
232 236Right-handed 310
Helix 33
AD6
C
237 253Right-handed alpha
Helix 34
AD7
C
281 289Right-handed alpha
Helix 35
AD8
C
290 295Right-handed 310
Helix 36
AD9
C
301 306Right-handed alpha
Helix 37
AE1
C
310 314Right-handed 310
Helix 38
AE2
C
318 323Right-handed alpha
Helix 39
AE3
C
325 335Right-handed alpha
Helix 40
AE4
C
335 342Right-handed alpha
Helix 41
AE5
C
348 356Right-handed alpha
Helix 42
AE6
C
356 363Right-handed alpha
Helix 43
AE7
C
365 373Right-handed alpha
Helix 44
AE8
C
381 390Right-handed alpha
Helix 45
AE9
C
400 409Right-handed alpha
Helix 46
AF1
C
412 423Right-handed alpha
Helix 47
AF2
C
471 473Right-handed 310
Helix 48
AF3
C
474 490Right-handed alpha
Helix 49
AF4
C
512 533Right-handed alpha
Helix 50
AF5
C
537 546Right-handed alpha
Helix 51
AF6
C
552 563Right-handed alpha
Helix 52
AF7
C
575 590Right-handed alpha
Helix 53
AF8
C
597 599Right-handed 310
Helix 54
AF9
C
652 657Right-handed 310
Helix 55
AG1
C
663 691Right-handed alpha
Helix 56
AG2
C
707 719Right-handed alpha
Helix 57
AG3
C
721 728Right-handed alpha
Helix 58
AG4
C
730 741Right-handed alpha
Helix 59
AG5
C
746 765Right-handed alpha
Helix 60
AG6
C
774 791Right-handed alpha
Helix 61
AG7
C
847 870Right-handed alpha
Helix 62
AG8
C
881 888Right-handed alpha
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There are 5 sheets in PDB entry 6V6B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
448 450first strand
Strand 2
B
464 466anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
623 625first strand
Strand 2
B
638 640anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
262 263first strand
Strand 2
C
274 275anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
437 438first strand
Strand 2
C
461 462anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
601 604first strand
Strand 2
C
645 648anti-parallel
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