Analysis of interatomic Contacts of Structural Units in PDB entry:
6V7W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6V7W entry

There are 6 chains in PDB entry 6V7W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PHE 7THR 238
A
 LYS 7ARG 61
C
 ASN 3LYS 62
E
 ASP 5THR 238
D
 LEU 6ARG 61
F
 ASP 5ARG 61
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6V7W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
15 31Right-handed alpha
Helix 2
AA2
B
57 67Right-handed alpha
Helix 3
AA3
B
73 80Right-handed alpha
Helix 4
AA4
B
89 93Right-handed 310
Helix 5
AA5
B
95 108Right-handed alpha
Helix 6
AA6
B
136 147Right-handed alpha
Helix 7
AA7
B
147 166Right-handed alpha
Helix 8
AA8
B
178 190Right-handed alpha
Helix 9
AA9
B
193 201Right-handed alpha
Helix 10
AB1
B
204 220Right-handed alpha
Helix 11
AB2
B
223 234Right-handed alpha
Helix 12
AB3
A
9 27Right-handed alpha
Helix 13
AB4
A
37 57Right-handed alpha
Helix 14
AB5
C
9 24Right-handed alpha
Helix 15
AB6
C
37 58Right-handed alpha
Helix 16
AB7
E
15 31Right-handed alpha
Helix 17
AB8
E
57 67Right-handed alpha
Helix 18
AB9
E
73 80Right-handed alpha
Helix 19
AC1
E
95 108Right-handed alpha
Helix 20
AC2
E
136 147Right-handed alpha
Helix 21
AC3
E
147 167Right-handed alpha
Helix 22
AC4
E
178 190Right-handed alpha
Helix 23
AC5
E
193 199Right-handed alpha
Helix 24
AC6
E
204 220Right-handed alpha
Helix 25
AC7
E
223 234Right-handed alpha
Helix 26
AC8
D
7 26Right-handed alpha
Helix 27
AC9
D
35 57Right-handed alpha
Helix 28
AD1
F
6 24Right-handed alpha
Helix 29
AD2
F
25 28Right-handed 310
Helix 30
AD3
F
36 57Right-handed alpha
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There are 2 sheets in PDB entry 6V7W. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 54first strand
Strand 2
B
34 40anti-parallel
Strand 3
B
125 132anti-parallel
Strand 4
B
112 119anti-parallel
Strand 5
B
86 87anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
51 54first strand
Strand 2
E
34 40anti-parallel
Strand 3
E
125 132anti-parallel
Strand 4
E
112 119anti-parallel
Strand 5
E
86 87anti-parallel
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