Analysis of interatomic Contacts of Structural Units in PDB entry:
6V81


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6V81 entry

There is 1 chain in PDB entry 6V81 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 40PHE 699
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6V81. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 56Right-handed alpha
Helix 2
AA2
A
63 67Right-handed 310
Helix 3
AA3
A
126 128Right-handed 310
Helix 4
AA4
A
139 145Right-handed 310
Helix 5
AA5
A
253 260Right-handed alpha
Helix 6
AA6
A
264 271Right-handed alpha
Helix 7
AA7
A
315 319Right-handed 310
Helix 8
AA8
A
475 480Right-handed alpha
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There are 7 sheets in PDB entry 6V81. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 51first strand
Strand 2
A
130 137anti-parallel
Strand 3
A
150 156anti-parallel
Strand 4
A
105 108parallel
Strand 5
A
111 112anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 77first strand
Strand 2
A
87 90anti-parallel
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There are 23 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 172first strand
Strand 2
A
176 186anti-parallel
Strand 3
A
196 207anti-parallel
Strand 4
A
216 228anti-parallel
Strand 5
A
234 247anti-parallel
Strand 6
A
273 288anti-parallel
Strand 7
A
293 309anti-parallel
Strand 8
A
326 342anti-parallel
Strand 9
A
350 368anti-parallel
Strand 10
A
386 408anti-parallel
Strand 11
A
411 428anti-parallel
Strand 12
A
440 456anti-parallel
Strand 13
A
461 468anti-parallel
Strand 14
A
500 509anti-parallel
Strand 15
A
512 523anti-parallel
Strand 16
A
545 558anti-parallel
Strand 17
A
562 575anti-parallel
Strand 18
A
596 604anti-parallel
Strand 19
A
611 619anti-parallel
Strand 20
A
635 648anti-parallel
Strand 21
A
651 660anti-parallel
Strand 22
A
688 698anti-parallel
Strand 23
A
164 172anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
471 472first strand
Strand 2
A
496 497anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
527 533first strand
Strand 2
A
536 541anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
622 623first strand
Strand 2
A
631 632anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
667 671first strand
Strand 2
A
681 684anti-parallel
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