Analysis of interatomic Contacts of Structural Units in PDB entry:
6V97


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6V97 entry

There are 2 chains in PDB entry 6V97 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 15GLY 659
B
 SER 15GLY 659
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6V97. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 52Right-handed alpha
Helix 2
AA2
A
79 84Right-handed alpha
Helix 3
AA3
A
119 132Right-handed alpha
Helix 4
AA4
A
135 137Right-handed 310
Helix 5
AA5
A
165 200Right-handed alpha
Helix 6
AA6
A
206 213Right-handed alpha
Helix 7
AA7
A
219 228Right-handed 310
Helix 8
AA8
A
236 240Right-handed 310
Helix 9
AA9
A
264 281Right-handed alpha
Helix 10
AB1
A
287 307Right-handed alpha
Helix 11
AB2
A
498 502Right-handed 310
Helix 12
AB3
A
504 509Right-handed alpha
Helix 13
AB4
A
512 525Right-handed alpha
Helix 14
AB5
A
531 544Right-handed alpha
Helix 15
AB6
A
623 638Right-handed alpha
Helix 16
AB7
A
649 658Right-handed alpha
Helix 17
AB8
B
41 52Right-handed alpha
Helix 18
AB9
B
79 84Right-handed alpha
Helix 19
AC1
B
119 132Right-handed alpha
Helix 20
AC2
B
135 137Right-handed 310
Helix 21
AC3
B
165 200Right-handed alpha
Helix 22
AC4
B
206 213Right-handed alpha
Helix 23
AC5
B
219 228Right-handed 310
Helix 24
AC6
B
236 240Right-handed 310
Helix 25
AC7
B
264 281Right-handed alpha
Helix 26
AC8
B
287 308Right-handed alpha
Helix 27
AC9
B
498 502Right-handed 310
Helix 28
AD1
B
504 511Right-handed alpha
Helix 29
AD2
B
516 525Right-handed alpha
Helix 30
AD3
B
531 545Right-handed alpha
Helix 31
AD4
B
623 638Right-handed alpha
Helix 32
AD5
B
649 657Right-handed alpha
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There are 6 sheets in PDB entry 6V97. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
16 21anti-parallel
Strand 3
A
91 95parallel
Strand 4
A
62 66anti-parallel
Strand 5
A
71 72anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 115first strand
Strand 2
A
97 103anti-parallel
Strand 3
A
246 251parallel
Strand 4
A
139 142anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
583 589first strand
Strand 2
A
573 578anti-parallel
Strand 3
A
565 569anti-parallel
Strand 4
A
552 558anti-parallel
Strand 5
A
613 619anti-parallel
Strand 6
A
604 609anti-parallel
Strand 7
A
593 599anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 36first strand
Strand 2
B
16 21anti-parallel
Strand 3
B
91 95parallel
Strand 4
B
62 66anti-parallel
Strand 5
B
71 72anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 115first strand
Strand 2
B
97 103anti-parallel
Strand 3
B
246 251parallel
Strand 4
B
139 142anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
584 589first strand
Strand 2
B
573 577anti-parallel
Strand 3
B
565 569anti-parallel
Strand 4
B
552 558anti-parallel
Strand 5
B
613 619anti-parallel
Strand 6
B
604 609anti-parallel
Strand 7
B
593 599anti-parallel
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