Analysis of interatomic Contacts of Structural Units in PDB entry:
6V9I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6V9I entry

There are 2 chains in PDB entry 6V9I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLN 14ALA 780
R
 ASP 27LYS 113
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6V9I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
14 31Right-handed alpha
Helix 2
AA2
C
36 54Right-handed alpha
Helix 3
AA3
C
56 82Right-handed alpha
Helix 4
AA4
C
85 107Right-handed alpha
Helix 5
AA5
C
111 118Right-handed alpha
Helix 6
AA6
C
133 147Right-handed alpha
Helix 7
AA7
C
152 169Right-handed alpha
Helix 8
AA8
C
174 188Right-handed alpha
Helix 9
AA9
C
195 225Right-handed alpha
Helix 10
AB1
C
226 248Right-handed alpha
Helix 11
AB2
C
256 287Right-handed alpha
Helix 12
AB3
C
289 303Right-handed alpha
Helix 13
AB4
C
306 334Right-handed alpha
Helix 14
AB5
C
336 358Right-handed alpha
Helix 15
AB6
C
362 379Right-handed alpha
Helix 16
AB7
C
404 417Right-handed alpha
Helix 17
AB8
C
421 425Right-handed 310
Helix 18
AB9
C
426 444Right-handed alpha
Helix 19
AC1
C
446 465Right-handed alpha
Helix 20
AC2
C
470 484Right-handed alpha
Helix 21
AC3
C
486 514Right-handed alpha
Helix 22
AC4
C
522 524Right-handed 310
Helix 23
AC5
C
533 537Right-handed alpha
Helix 24
AC6
C
548 553Right-handed alpha
Helix 25
AC7
C
554 566Right-handed alpha
Helix 26
AC8
C
574 577Right-handed 310
Helix 27
AC9
C
597 605Right-handed alpha
Helix 28
AD1
C
616 624Right-handed alpha
Helix 29
AD2
C
626 640Right-handed alpha
Helix 30
AD3
C
656 660Right-handed 310
Helix 31
AD4
C
689 694Right-handed 310
Helix 32
AD5
C
697 726Right-handed alpha
Helix 33
AD6
C
731 743Right-handed alpha
Helix 34
AD7
C
749 763Right-handed alpha
Helix 35
AD8
R
63 68Right-handed alpha
Helix 36
AD9
R
86 94Right-handed alpha
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There are 6 sheets in PDB entry 6V9I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
526 532first strand
Strand 2
R
30 43parallel
Strand 3
C
569 572anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
526 532first strand
Strand 2
R
30 43parallel
Strand 3
C
579 586anti-parallel
Strand 4
C
589 596anti-parallel
Strand 5
C
683 687parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
614 615first strand
Strand 2
C
665 668anti-parallel
Strand 3
C
648 650anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
675 676first strand
Strand 2
C
679 680anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
728 730first strand
Strand 2
C
772 778anti-parallel
Strand 3
C
766 769anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
83 85first strand
Strand 2
R
75 78anti-parallel
Strand 3
R
108 110anti-parallel
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