Analysis of interatomic Contacts of Structural Units in PDB entry:
6V9X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6V9X entry

There are 8 chains in PDB entry 6V9X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 447	LYS 620
A	PRO 622	THR 1078
B	LYS 447	LYS 620
B	PRO 622	THR 1078
D	LYS 447	LYS 620
D	PRO 622	THR 1078
C	LYS 447	LYS 620
C	PRO 622	THR 1078

There are132 helices in PDB entry 6V9X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	447	456	Right-handed alpha
Helix 2	AA2	A	458	466	Right-handed alpha
Helix 3	AA3	A	484	492	Right-handed alpha
Helix 4	AA4	A	494	503	Right-handed alpha
Helix 5	AA5	A	511	515	Right-handed 310
Helix 6	AA6	A	516	523	Right-handed alpha
Helix 7	AA7	A	526	535	Right-handed alpha
Helix 8	AA8	A	539	543	Right-handed 310
Helix 9	AA9	A	550	558	Right-handed alpha
Helix 10	AB1	A	560	570	Right-handed alpha
Helix 11	AB2	A	582	590	Right-handed alpha
Helix 12	AB3	A	592	601	Right-handed alpha
Helix 13	AB4	A	604	610	Right-handed alpha
Helix 14	AB5	A	621	630	Right-handed alpha
Helix 15	AB6	A	630	642	Right-handed alpha
Helix 16	AB7	A	666	670	Right-handed 310
Helix 17	AB8	A	683	692	Right-handed alpha
Helix 18	AB9	A	694	699	Right-handed alpha
Helix 19	AC1	A	700	714	Right-handed alpha
Helix 20	AC2	A	714	740	Right-handed alpha
Helix 21	AC3	A	769	790	Right-handed alpha
Helix 22	AC4	A	803	820	Right-handed alpha
Helix 23	AC5	A	821	823	Right-handed 310
Helix 24	AC6	A	827	852	Right-handed alpha
Helix 25	AC7	A	857	892	Right-handed alpha
Helix 26	AC8	A	900	914	Right-handed alpha
Helix 27	AC9	A	917	922	Right-handed alpha
Helix 28	AD1	A	922	928	Right-handed alpha
Helix 29	AD2	A	933	946	Right-handed alpha
Helix 30	AD3	A	946	969	Right-handed alpha
Helix 31	AD4	A	970	990	Right-handed alpha
Helix 32	AD5	A	991	999	Right-handed alpha
Helix 33	AD6	A	1040	1069	Right-handed alpha
Helix 34	AD7	B	448	456	Right-handed alpha
Helix 35	AD8	B	458	466	Right-handed alpha
Helix 36	AD9	B	484	492	Right-handed alpha
Helix 37	AE1	B	494	503	Right-handed alpha
Helix 38	AE2	B	511	515	Right-handed 310
Helix 39	AE3	B	516	523	Right-handed alpha
Helix 40	AE4	B	526	535	Right-handed alpha
Helix 41	AE5	B	539	543	Right-handed 310
Helix 42	AE6	B	550	558	Right-handed alpha
Helix 43	AE7	B	560	570	Right-handed alpha
Helix 44	AE8	B	582	590	Right-handed alpha
Helix 45	AE9	B	592	601	Right-handed alpha
Helix 46	AF1	B	604	610	Right-handed alpha
Helix 47	AF2	B	621	630	Right-handed alpha
Helix 48	AF3	B	630	642	Right-handed alpha
Helix 49	AF4	B	666	670	Right-handed 310
Helix 50	AF5	B	683	692	Right-handed alpha
Helix 51	AF6	B	694	699	Right-handed alpha
Helix 52	AF7	B	700	714	Right-handed alpha
Helix 53	AF8	B	714	740	Right-handed alpha
Helix 54	AF9	B	769	790	Right-handed alpha
Helix 55	AG1	B	803	820	Right-handed alpha
Helix 56	AG2	B	821	823	Right-handed 310
Helix 57	AG3	B	827	852	Right-handed alpha
Helix 58	AG4	B	857	892	Right-handed alpha
Helix 59	AG5	B	900	914	Right-handed alpha
Helix 60	AG6	B	917	922	Right-handed alpha
Helix 61	AG7	B	922	928	Right-handed alpha
Helix 62	AG8	B	933	946	Right-handed alpha
Helix 63	AG9	B	946	969	Right-handed alpha
Helix 64	AH1	B	970	990	Right-handed alpha
Helix 65	AH2	B	991	999	Right-handed alpha
Helix 66	AH3	B	1040	1069	Right-handed alpha
Helix 67	AH4	D	448	456	Right-handed alpha
Helix 68	AH5	D	458	466	Right-handed alpha
Helix 69	AH6	D	484	492	Right-handed alpha
Helix 70	AH7	D	494	503	Right-handed alpha
Helix 71	AH8	D	511	515	Right-handed 310
Helix 72	AH9	D	516	523	Right-handed alpha
Helix 73	AI1	D	526	535	Right-handed alpha
Helix 74	AI2	D	539	543	Right-handed 310
Helix 75	AI3	D	550	558	Right-handed alpha
Helix 76	AI4	D	560	570	Right-handed alpha
Helix 77	AI5	D	582	590	Right-handed alpha
Helix 78	AI6	D	592	601	Right-handed alpha
Helix 79	AI7	D	604	610	Right-handed alpha
Helix 80	AI8	D	621	630	Right-handed alpha
Helix 81	AI9	D	630	642	Right-handed alpha
Helix 82	AJ1	D	666	670	Right-handed 310
Helix 83	AJ2	D	683	692	Right-handed alpha
Helix 84	AJ3	D	694	699	Right-handed alpha
Helix 85	AJ4	D	700	714	Right-handed alpha
Helix 86	AJ5	D	714	740	Right-handed alpha
Helix 87	AJ6	D	769	790	Right-handed alpha
Helix 88	AJ7	D	803	820	Right-handed alpha
Helix 89	AJ8	D	821	823	Right-handed 310
Helix 90	AJ9	D	827	852	Right-handed alpha
Helix 91	AK1	D	857	892	Right-handed alpha
Helix 92	AK2	D	900	914	Right-handed alpha
Helix 93	AK3	D	917	922	Right-handed alpha
Helix 94	AK4	D	922	928	Right-handed alpha
Helix 95	AK5	D	933	946	Right-handed alpha
Helix 96	AK6	D	946	969	Right-handed alpha
Helix 97	AK7	D	970	990	Right-handed alpha
Helix 98	AK8	D	991	999	Right-handed alpha
Helix 99	AK9	D	1040	1069	Right-handed alpha
Helix 100	AL1	C	448	456	Right-handed alpha
Helix 101	AL2	C	458	466	Right-handed alpha
Helix 102	AL3	C	484	492	Right-handed alpha
Helix 103	AL4	C	494	503	Right-handed alpha
Helix 104	AL5	C	511	515	Right-handed 310
Helix 105	AL6	C	516	523	Right-handed alpha
Helix 106	AL7	C	526	535	Right-handed alpha
Helix 107	AL8	C	539	543	Right-handed 310
Helix 108	AL9	C	550	558	Right-handed alpha
Helix 109	AM1	C	560	570	Right-handed alpha
Helix 110	AM2	C	582	590	Right-handed alpha
Helix 111	AM3	C	592	601	Right-handed alpha
Helix 112	AM4	C	604	610	Right-handed alpha
Helix 113	AM5	C	621	630	Right-handed alpha
Helix 114	AM6	C	630	642	Right-handed alpha
Helix 115	AM7	C	666	670	Right-handed 310
Helix 116	AM8	C	683	692	Right-handed alpha
Helix 117	AM9	C	694	699	Right-handed alpha
Helix 118	AN1	C	700	714	Right-handed alpha
Helix 119	AN2	C	714	740	Right-handed alpha
Helix 120	AN3	C	769	790	Right-handed alpha
Helix 121	AN4	C	803	820	Right-handed alpha
Helix 122	AN5	C	821	823	Right-handed 310
Helix 123	AN6	C	827	852	Right-handed alpha
Helix 124	AN7	C	857	892	Right-handed alpha
Helix 125	AN8	C	900	914	Right-handed alpha
Helix 126	AN9	C	917	922	Right-handed alpha
Helix 127	AO1	C	922	928	Right-handed alpha
Helix 128	AO2	C	933	946	Right-handed alpha
Helix 129	AO3	C	946	969	Right-handed alpha
Helix 130	AO4	C	970	990	Right-handed alpha
Helix 131	AO5	C	991	999	Right-handed alpha
Helix 132	AO6	C	1040	1069	Right-handed alpha

There are 4 sheets in PDB entry 6V9X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	656	657	first strand
Strand 2	A	1004	1005	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	656	657	first strand
Strand 2	B	1004	1005	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	656	657	first strand
Strand 2	D	1004	1005	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	656	657	first strand
Strand 2	C	1004	1005	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6V9X

Analysis of interatomic Contacts of Structural Units in PDB entry:
6V9X