Analysis of interatomic Contacts of Structural Units in PDB entry:
6VBH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6VBH entry

There is 1 chain in PDB entry 6VBH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLN 987
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6VBH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 11Right-handed alpha
Helix 2
AA2
A
12 14Right-handed 310
Helix 3
AA3
A
18 23Right-handed 310
Helix 4
AA4
A
31 36Right-handed alpha
Helix 5
AA5
A
52 68Right-handed alpha
Helix 6
AA6
A
89 94Right-handed alpha
Helix 7
AA7
A
100 112Right-handed alpha
Helix 8
AA8
A
128 780Right-handed alpha
Helix 9
AA9
A
789 800Right-handed alpha
Helix 10
AB1
A
811 816Right-handed alpha
Helix 11
AB2
A
837 845Right-handed alpha
Helix 12
AB3
A
847 859Right-handed alpha
Helix 13
AB4
A
870 881Right-handed alpha
Helix 14
AB5
A
886 902Right-handed alpha
Helix 15
AB6
A
912 920Right-handed alpha
Helix 16
AB7
A
929 938Right-handed alpha
Helix 17
AB8
A
954 967Right-handed alpha
Helix 18
AB9
A
969 986Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6VBH.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
832 836anti-parallel
Strand 3
A
820 823anti-parallel
Strand 4
A
806 807parallel
Strand 5
A
26 30parallel
Strand 6
A
71 76parallel
Strand 7
A
783 785parallel
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