Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 6VJQ entry
There are 5 chains in PDB entry 6VJQ
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
CYS 1 | ILE 3 |
A
|
GLY 5 | GLY 9 |
A
|
ALA 11 | PRO 12 |
A
|
ASN 14 | CYS 18 |
A
|
LYS 20 | TYR 28 |
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There is 1
helix in PDB entry 6VJQ. Click on helix number for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
AA1 | A
| 1 |
5 | Right-handed 310 |
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There are no sheets in PDB entry
6VJQ
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il