Analysis of interatomic Contacts of Structural Units in PDB entry:
6VJZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6VJZ entry

There are 4 chains in PDB entry 6VJZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 PRO 13ILE 192
B
 MET 1ASN 324
A
 PRO 26THR 686
D
 HIS 745ASP 789
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 55 helices in PDB entry 6VJZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
13 32Right-handed alpha
Helix 2
AA2
C
36 41Right-handed alpha
Helix 3
AA3
C
43 51Right-handed alpha
Helix 4
AA4
C
52 62Right-handed alpha
Helix 5
AA5
C
67 86Right-handed alpha
Helix 6
AA6
C
90 113Right-handed alpha
Helix 7
AA7
C
117 134Right-handed alpha
Helix 8
AA8
C
151 166Right-handed alpha
Helix 9
AA9
C
170 192Right-handed alpha
Helix 10
AB1
B
3 31Right-handed alpha
Helix 11
AB2
B
34 43Right-handed alpha
Helix 12
AB3
B
44 72Right-handed alpha
Helix 13
AB4
B
75 98Right-handed alpha
Helix 14
AB5
B
99 100Right-handed 310
Helix 15
AB6
B
101 104Right-handed 310
Helix 16
AB7
B
105 135Right-handed alpha
Helix 17
AB8
B
143 175Right-handed alpha
Helix 18
AB9
B
179 220Right-handed alpha
Helix 19
AC1
B
266 294Right-handed alpha
Helix 20
AC2
B
297 324Right-handed alpha
Helix 21
AC3
A
27 35Right-handed alpha
Helix 22
AC4
A
42 47Right-handed alpha
Helix 23
AC5
A
66 80Right-handed alpha
Helix 24
AC6
A
83 100Right-handed alpha
Helix 25
AC7
A
104 116Right-handed alpha
Helix 26
AC8
A
123 139Right-handed alpha
Helix 27
AC9
A
142 156Right-handed alpha
Helix 28
AD1
A
170 185Right-handed alpha
Helix 29
AD2
A
186 199Right-handed alpha
Helix 30
AD3
A
206 223Right-handed alpha
Helix 31
AD4
A
226 232Right-handed alpha
Helix 32
AD5
A
315 331Right-handed alpha
Helix 33
AD6
A
339 355Right-handed alpha
Helix 34
AD7
A
357 361Right-handed 310
Helix 35
AD8
A
364 383Right-handed alpha
Helix 36
AD9
A
390 407Right-handed alpha
Helix 37
AE1
A
412 426Right-handed alpha
Helix 38
AE2
A
429 442Right-handed alpha
Helix 39
AE3
A
448 461Right-handed alpha
Helix 40
AE4
A
462 465Right-handed 310
Helix 41
AE5
A
468 480Right-handed alpha
Helix 42
AE6
A
481 495Right-handed alpha
Helix 43
AE7
A
501 517Right-handed alpha
Helix 44
AE8
A
522 533Right-handed alpha
Helix 45
AE9
A
535 548Right-handed alpha
Helix 46
AF1
A
551 563Right-handed alpha
Helix 47
AF2
A
576 594Right-handed alpha
Helix 48
AF3
A
597 610Right-handed alpha
Helix 49
AF4
A
614 624Right-handed alpha
Helix 50
AF5
A
627 640Right-handed alpha
Helix 51
AF6
A
647 662Right-handed alpha
Helix 52
AF7
A
665 686Right-handed alpha
Helix 53
AF8
D
746 753Right-handed alpha
Helix 54
AF9
D
763 777Right-handed alpha
Helix 55
AG1
D
781 789Right-handed alpha
Back to top of page
There are no sheets in PDB entry 6VJZ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il