Analysis of interatomic Contacts of Structural Units in PDB entry:
6VK0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6VK0 entry

There are 4 chains in PDB entry 6VK0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 SER 533ASP 789
C
 PRO 13ILE 192
A
 PRO 26THR 686
B
 MET 1ASN 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 6VK0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
535 544Right-handed alpha
Helix 2
AA2
D
549 551Right-handed 310
Helix 3
AA3
D
552 562Right-handed alpha
Helix 4
AA4
D
563 565Right-handed 310
Helix 5
AA5
D
566 567Right-handed 310
Helix 6
AA6
D
568 581Right-handed alpha
Helix 7
AA7
D
746 753Right-handed alpha
Helix 8
AA8
D
763 778Right-handed alpha
Helix 9
AA9
D
780 789Right-handed alpha
Helix 10
AB1
C
14 32Right-handed alpha
Helix 11
AB2
C
43 51Right-handed alpha
Helix 12
AB3
C
53 58Right-handed alpha
Helix 13
AB4
C
59 61Right-handed 310
Helix 14
AB5
C
67 85Right-handed alpha
Helix 15
AB6
C
86 88Right-handed 310
Helix 16
AB7
C
92 110Right-handed alpha
Helix 17
AB8
C
117 134Right-handed alpha
Helix 18
AB9
C
152 165Right-handed alpha
Helix 19
AC1
C
168 174Right-handed alpha
Helix 20
AC2
C
176 192Right-handed alpha
Helix 21
AC3
A
27 35Right-handed alpha
Helix 22
AC4
A
42 47Right-handed alpha
Helix 23
AC5
A
66 81Right-handed alpha
Helix 24
AC6
A
83 100Right-handed alpha
Helix 25
AC7
A
105 116Right-handed alpha
Helix 26
AC8
A
123 139Right-handed alpha
Helix 27
AC9
A
142 156Right-handed alpha
Helix 28
AD1
A
170 185Right-handed alpha
Helix 29
AD2
A
187 197Right-handed alpha
Helix 30
AD3
A
206 225Right-handed alpha
Helix 31
AD4
A
226 232Right-handed alpha
Helix 32
AD5
A
316 329Right-handed alpha
Helix 33
AD6
A
339 355Right-handed alpha
Helix 34
AD7
A
357 361Right-handed 310
Helix 35
AD8
A
364 383Right-handed alpha
Helix 36
AD9
A
390 407Right-handed alpha
Helix 37
AE1
A
408 410Right-handed 310
Helix 38
AE2
A
412 426Right-handed alpha
Helix 39
AE3
A
429 441Right-handed alpha
Helix 40
AE4
A
448 461Right-handed alpha
Helix 41
AE5
A
462 465Right-handed 310
Helix 42
AE6
A
468 480Right-handed alpha
Helix 43
AE7
A
481 495Right-handed alpha
Helix 44
AE8
A
501 517Right-handed alpha
Helix 45
AE9
A
522 532Right-handed alpha
Helix 46
AF1
A
535 550Right-handed alpha
Helix 47
AF2
A
551 563Right-handed alpha
Helix 48
AF3
A
576 594Right-handed alpha
Helix 49
AF4
A
596 610Right-handed alpha
Helix 50
AF5
A
613 624Right-handed alpha
Helix 51
AF6
A
627 639Right-handed alpha
Helix 52
AF7
A
647 662Right-handed alpha
Helix 53
AF8
A
665 685Right-handed alpha
Helix 54
AF9
B
3 31Right-handed alpha
Helix 55
AG1
B
34 43Right-handed alpha
Helix 56
AG2
B
44 71Right-handed alpha
Helix 57
AG3
B
75 99Right-handed alpha
Helix 58
AG4
B
101 104Right-handed 310
Helix 59
AG5
B
105 135Right-handed alpha
Helix 60
AG6
B
143 175Right-handed alpha
Helix 61
AG7
B
179 220Right-handed alpha
Helix 62
AG8
B
266 294Right-handed alpha
Helix 63
AG9
B
297 324Right-handed alpha
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There are no sheets in PDB entry 6VK0
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il