Analysis of interatomic Contacts of Structural Units in PDB entry:
6VOH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6VOH entry

There are 26 chains in PDB entry 6VOH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 6	GLN 506
C	ARG 5	GLN 504
B	ALA 2	LEU 503
D	LYS 17	SER 494
E	GLU 16	LEU 496
F	LYS 17	LEU 496
d	ASP 72	MET 250
g	CYS 41	CYS 363
e	MET 1	THR 131
J	ASP 85	PRO 220
I	ASN 30	ILE 182
a	VAL 22	GLU 244
T	PRO 3	VAL 81
Y	PRO 3	VAL 81
X	PRO 3	VAL 81
W	PRO 3	VAL 81
V	PRO 3	VAL 81
U	PRO 3	VAL 81
Z	PRO 3	VAL 81
S	PRO 3	VAL 81
R	PRO 3	VAL 81
Q	PRO 3	VAL 81
M	PRO 3	VAL 81
N	PRO 3	VAL 81
O	PRO 3	VAL 81
P	PRO 3	VAL 81

There are176 helices in PDB entry 6VOH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	25	Right-handed alpha
Helix 2	AA2	A	151	156	Right-handed alpha
Helix 3	AA3	A	175	187	Right-handed alpha
Helix 4	AA4	A	202	216	Right-handed alpha
Helix 5	AA5	A	234	252	Right-handed alpha
Helix 6	AA6	A	263	278	Right-handed alpha
Helix 7	AA7	A	283	287	Right-handed 310
Helix 8	AA8	A	290	300	Right-handed alpha
Helix 9	AA9	A	306	310	Right-handed 310
Helix 10	AB1	A	329	337	Right-handed alpha
Helix 11	AB2	A	346	351	Right-handed alpha
Helix 12	AB3	A	367	372	Right-handed 310
Helix 13	AB4	A	373	380	Right-handed alpha
Helix 14	AB5	A	382	397	Right-handed alpha
Helix 15	AB6	A	404	419	Right-handed alpha
Helix 16	AB7	A	430	443	Right-handed alpha
Helix 17	AB8	A	444	447	Right-handed 310
Helix 18	AB9	A	453	468	Right-handed alpha
Helix 19	AC1	A	470	476	Right-handed alpha
Helix 20	AC2	A	483	504	Right-handed alpha
Helix 21	AC3	C	7	20	Right-handed alpha
Helix 22	AC4	C	101	105	Right-handed 310
Helix 23	AC5	C	152	157	Right-handed alpha
Helix 24	AC6	C	175	187	Right-handed alpha
Helix 25	AC7	C	202	216	Right-handed alpha
Helix 26	AC8	C	217	222	Right-handed 310
Helix 27	AC9	C	232	253	Right-handed alpha
Helix 28	AD1	C	263	278	Right-handed alpha
Helix 29	AD2	C	283	287	Right-handed 310
Helix 30	AD3	C	290	300	Right-handed alpha
Helix 31	AD4	C	329	339	Right-handed alpha
Helix 32	AD5	C	346	352	Right-handed alpha
Helix 33	AD6	C	373	393	Right-handed alpha
Helix 34	AD7	C	394	400	Right-handed 310
Helix 35	AD8	C	404	422	Right-handed alpha
Helix 36	AD9	C	430	443	Right-handed alpha
Helix 37	AE1	C	452	469	Right-handed alpha
Helix 38	AE2	C	469	480	Right-handed alpha
Helix 39	AE3	C	483	503	Right-handed alpha
Helix 40	AE4	B	9	19	Right-handed alpha
Helix 41	AE5	B	151	158	Right-handed alpha
Helix 42	AE6	B	176	187	Right-handed alpha
Helix 43	AE7	B	202	217	Right-handed alpha
Helix 44	AE8	B	218	221	Right-handed 310
Helix 45	AE9	B	232	253	Right-handed alpha
Helix 46	AF1	B	263	277	Right-handed alpha
Helix 47	AF2	B	283	287	Right-handed 310
Helix 48	AF3	B	290	300	Right-handed alpha
Helix 49	AF4	B	330	339	Right-handed alpha
Helix 50	AF5	B	346	353	Right-handed alpha
Helix 51	AF6	B	367	371	Right-handed 310
Helix 52	AF7	B	375	396	Right-handed alpha
Helix 53	AF8	B	410	421	Right-handed alpha
Helix 54	AF9	B	430	443	Right-handed alpha
Helix 55	AG1	B	453	469	Right-handed alpha
Helix 56	AG2	B	469	479	Right-handed alpha
Helix 57	AG3	B	483	503	Right-handed alpha
Helix 58	AG4	D	103	107	Right-handed 310
Helix 59	AG5	D	153	159	Right-handed alpha
Helix 60	AG6	D	177	189	Right-handed alpha
Helix 61	AG7	D	205	219	Right-handed alpha
Helix 62	AG8	D	227	231	Right-handed 310
Helix 63	AG9	D	248	263	Right-handed alpha
Helix 64	AH1	D	274	289	Right-handed alpha
Helix 65	AH2	D	304	312	Right-handed alpha
Helix 66	AH3	D	329	333	Right-handed 310
Helix 67	AH4	D	336	346	Right-handed alpha
Helix 68	AH5	D	353	360	Right-handed alpha
Helix 69	AH6	D	376	381	Right-handed alpha
Helix 70	AH7	D	381	401	Right-handed alpha
Helix 71	AH8	D	409	413	Right-handed 310
Helix 72	AH9	D	414	431	Right-handed alpha
Helix 73	AI1	D	450	463	Right-handed alpha
Helix 74	AI2	D	470	474	Right-handed 310
Helix 75	AI3	D	479	494	Right-handed alpha
Helix 76	AI4	E	153	160	Right-handed alpha
Helix 77	AI5	E	177	192	Right-handed alpha
Helix 78	AI6	E	205	219	Right-handed alpha
Helix 79	AI7	E	244	265	Right-handed alpha
Helix 80	AI8	E	274	290	Right-handed alpha
Helix 81	AI9	E	301	311	Right-handed alpha
Helix 82	AJ1	E	336	344	Right-handed alpha
Helix 83	AJ2	E	353	360	Right-handed alpha
Helix 84	AJ3	E	376	381	Right-handed alpha
Helix 85	AJ4	E	381	402	Right-handed alpha
Helix 86	AJ5	E	414	432	Right-handed alpha
Helix 87	AJ6	E	438	443	Right-handed alpha
Helix 88	AJ7	E	450	464	Right-handed alpha
Helix 89	AJ8	E	470	474	Right-handed 310
Helix 90	AJ9	E	479	494	Right-handed alpha
Helix 91	AK1	F	153	159	Right-handed alpha
Helix 92	AK2	F	179	193	Right-handed alpha
Helix 93	AK3	F	205	219	Right-handed alpha
Helix 94	AK4	F	226	230	Right-handed 310
Helix 95	AK5	F	244	263	Right-handed alpha
Helix 96	AK6	F	276	289	Right-handed alpha
Helix 97	AK7	F	301	311	Right-handed alpha
Helix 98	AK8	F	329	333	Right-handed 310
Helix 99	AK9	F	336	341	Right-handed alpha
Helix 100	AL1	F	341	346	Right-handed alpha
Helix 101	AL2	F	353	359	Right-handed alpha
Helix 102	AL3	F	376	381	Right-handed alpha
Helix 103	AL4	F	381	408	Right-handed alpha
Helix 104	AL5	F	414	431	Right-handed alpha
Helix 105	AL6	F	438	443	Right-handed alpha
Helix 106	AL7	F	450	463	Right-handed alpha
Helix 107	AL8	F	470	474	Right-handed 310
Helix 108	AL9	F	479	496	Right-handed alpha
Helix 109	AM1	d	73	89	Right-handed alpha
Helix 110	AM2	d	91	107	Right-handed alpha
Helix 111	AM3	d	109	116	Right-handed alpha
Helix 112	AM4	d	121	137	Right-handed alpha
Helix 113	AM5	d	139	152	Right-handed alpha
Helix 114	AM6	d	153	156	Right-handed 310
Helix 115	AM7	d	157	174	Right-handed alpha
Helix 116	AM8	d	187	203	Right-handed alpha
Helix 117	AM9	d	236	249	Right-handed alpha
Helix 118	AN1	g	43	100	Right-handed alpha
Helix 119	AN2	g	107	111	Right-handed 310
Helix 120	AN3	g	132	152	Right-handed alpha
Helix 121	AN4	g	161	171	Right-handed alpha
Helix 122	AN5	g	187	203	Right-handed alpha
Helix 123	AN6	g	287	362	Right-handed alpha
Helix 124	AN7	e	88	104	Right-handed alpha
Helix 125	AN8	e	111	126	Right-handed alpha
Helix 126	AN9	e	126	131	Right-handed alpha
Helix 127	AO1	J	88	219	Right-handed alpha
Helix 128	AO2	I	31	70	Right-handed alpha
Helix 129	AO3	I	71	104	Right-handed alpha
Helix 130	AO4	I	105	159	Right-handed alpha
Helix 131	AO5	I	164	182	Right-handed alpha
Helix 132	AO6	a	37	53	Right-handed alpha
Helix 133	AO7	a	54	56	Right-handed 310
Helix 134	AO8	a	68	88	Right-handed alpha
Helix 135	AO9	a	91	93	Right-handed 310
Helix 136	AP1	a	94	114	Right-handed alpha
Helix 137	AP2	a	133	156	Right-handed alpha
Helix 138	AP3	a	176	208	Right-handed alpha
Helix 139	AP4	a	213	244	Right-handed alpha
Helix 140	AP5	T	4	42	Right-handed alpha
Helix 141	AP6	T	46	69	Right-handed alpha
Helix 142	AP7	T	71	76	Right-handed alpha
Helix 143	AP8	Y	4	42	Right-handed alpha
Helix 144	AP9	Y	45	76	Right-handed alpha
Helix 145	AQ1	X	4	23	Right-handed alpha
Helix 146	AQ2	X	23	42	Right-handed alpha
Helix 147	AQ3	X	45	61	Right-handed alpha
Helix 148	AQ4	X	61	76	Right-handed alpha
Helix 149	AQ5	W	6	42	Right-handed alpha
Helix 150	AQ6	W	45	76	Right-handed alpha
Helix 151	AQ7	V	6	21	Right-handed alpha
Helix 152	AQ8	V	22	42	Right-handed alpha
Helix 153	AQ9	V	45	50	Right-handed alpha
Helix 154	AR1	V	56	78	Right-handed alpha
Helix 155	AR2	U	4	42	Right-handed alpha
Helix 156	AR3	U	45	76	Right-handed alpha
Helix 157	AR4	Z	4	21	Right-handed alpha
Helix 158	AR5	Z	21	42	Right-handed alpha
Helix 159	AR6	Z	45	76	Right-handed alpha
Helix 160	AR7	S	4	21	Right-handed alpha
Helix 161	AR8	S	21	42	Right-handed alpha
Helix 162	AR9	S	45	76	Right-handed alpha
Helix 163	AS1	R	4	42	Right-handed alpha
Helix 164	AS2	R	48	76	Right-handed alpha
Helix 165	AS3	Q	4	42	Right-handed alpha
Helix 166	AS4	Q	45	76	Right-handed alpha
Helix 167	AS5	M	4	20	Right-handed alpha
Helix 168	AS6	M	21	42	Right-handed alpha
Helix 169	AS7	M	45	76	Right-handed alpha
Helix 170	AS8	N	4	37	Right-handed alpha
Helix 171	AS9	N	41	45	Right-handed 310
Helix 172	AT1	N	47	76	Right-handed alpha
Helix 173	AT2	O	4	42	Right-handed alpha
Helix 174	AT3	O	45	72	Right-handed alpha
Helix 175	AT4	P	4	42	Right-handed alpha
Helix 176	AT5	P	46	76	Right-handed alpha

There are 28 sheets in PDB entry 6VOH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	91	93	first strand
Strand 2	F	46	51	anti-parallel
Strand 3	F	59	68	anti-parallel
Strand 4	F	73	78	anti-parallel
Strand 5	F	30	34	anti-parallel
Strand 6	F	23	27	anti-parallel
Strand 7	A	61	67	anti-parallel
Strand 8	A	71	76	anti-parallel
Strand 9	A	39	44	anti-parallel
Strand 10	A	29	35	anti-parallel
Strand 11	A	88	95	anti-parallel
Strand 12	A	52	55	anti-parallel
Strand 13	A	61	67	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	98	first strand
Strand 2	A	128	129	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	109	first strand
Strand 2	A	224	227	parallel
Strand 3	A	194	199	parallel
Strand 4	A	256	262	parallel
Strand 5	A	313	314	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	62	first strand
Strand 2	C	54	55	anti-parallel
Strand 3	C	89	91	anti-parallel
Strand 4	C	29	35	anti-parallel
Strand 5	C	39	43	anti-parallel
Strand 6	C	72	75	anti-parallel
Strand 7	C	66	67	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	99	first strand
Strand 2	C	127	129	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	319	321	first strand
Strand 2	C	168	170	parallel
Strand 3	C	343	345	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	199	first strand
Strand 2	C	226	227	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	42	first strand
Strand 2	B	30	33	anti-parallel
Strand 3	B	88	91	anti-parallel
Strand 4	B	53	55	anti-parallel
Strand 5	B	61	67	anti-parallel
Strand 6	D	20	27	anti-parallel
Strand 7	B	72	76	first strand

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There are 12 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	42	first strand
Strand 2	B	30	33	anti-parallel
Strand 3	B	88	91	anti-parallel
Strand 4	B	53	55	anti-parallel
Strand 5	B	61	67	anti-parallel
Strand 6	D	91	93	first strand
Strand 7	D	46	49	anti-parallel
Strand 8	D	62	68	anti-parallel
Strand 9	D	73	78	anti-parallel
Strand 10	D	30	34	anti-parallel
Strand 11	D	20	27	anti-parallel
Strand 12	B	72	76	first strand

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	98	first strand
Strand 2	B	128	129	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	109	first strand
Strand 2	B	224	228	parallel
Strand 3	B	193	201	parallel
Strand 4	B	256	262	parallel
Strand 5	B	313	315	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	341	342	first strand
Strand 2	B	364	365	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	99	101	first strand
Strand 2	D	129	131	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	323	325	first strand
Strand 2	D	167	172	parallel
Strand 3	D	350	352	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	25	27	first strand
Strand 2	E	30	33	anti-parallel
Strand 3	E	74	78	anti-parallel
Strand 4	E	62	68	anti-parallel
Strand 5	E	46	49	anti-parallel
Strand 6	E	91	93	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	110	111	first strand
Strand 2	E	234	235	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	148	149	first strand
Strand 2	E	162	163	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	169	170	first strand
Strand 2	E	323	326	parallel
Strand 3	E	268	272	parallel
Strand 4	E	196	199	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	348	349	first strand
Strand 2	E	371	372	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	99	101	first strand
Strand 2	F	129	131	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	148	149	first strand
Strand 2	F	162	163	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	232	237	first strand
Strand 2	F	197	202	parallel
Strand 3	F	269	273	parallel
Strand 4	F	322	326	parallel
Strand 5	F	167	169	parallel
Strand 6	F	348	349	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	212	213	first strand
Strand 2	d	180	182	parallel
Strand 3	d	221	223	anti-parallel
Strand 4	d	233	235	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	g	158	159	first strand
Strand 2	g	121	122	parallel
Strand 3	g	211	213	parallel
Strand 4	g	228	229	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	g	256	259	first strand
Strand 2	g	264	267	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	g	283	284	first strand
Strand 2	e	40	42	parallel
Strand 3	e	67	69	anti-parallel
Strand 4	e	75	77	anti-parallel
Strand 5	e	3	9	parallel
Strand 6	e	12	19	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	22	23	first strand
Strand 2	e	47	51	anti-parallel
Strand 3	e	59	62	anti-parallel
Strand 4	e	81	82	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	28	29	first strand
Strand 2	a	35	36	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6VOH

Analysis of interatomic Contacts of Structural Units in PDB entry:
6VOH