Analysis of interatomic Contacts of Structural Units in PDB entry:
6VP0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6VP0 entry

There are 2 chains in PDB entry 6VP0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 TRP 64TYR 481
E
 TRP 64TYR 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6VP0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
77 81Right-handed 310
Helix 2
AA2
C
85 113Right-handed alpha
Helix 3
AA3
C
116 127Right-handed alpha
Helix 4
AA4
C
128 130Right-handed 310
Helix 5
AA5
C
131 156Right-handed alpha
Helix 6
AA6
C
160 186Right-handed alpha
Helix 7
AA7
C
192 223Right-handed alpha
Helix 8
AA8
C
248 258Right-handed alpha
Helix 9
AA9
C
274 305Right-handed alpha
Helix 10
AB1
C
315 343Right-handed alpha
Helix 11
AB2
C
343 354Right-handed alpha
Helix 12
AB3
C
363 367Right-handed 310
Helix 13
AB4
C
369 377Right-handed alpha
Helix 14
AB5
C
378 389Right-handed alpha
Helix 15
AB6
C
389 396Right-handed alpha
Helix 16
AB7
C
399 424Right-handed alpha
Helix 17
AB8
C
428 448Right-handed alpha
Helix 18
AB9
C
450 463Right-handed alpha
Helix 19
AC1
C
464 481Right-handed alpha
Helix 20
AC2
E
77 81Right-handed 310
Helix 21
AC3
E
85 113Right-handed alpha
Helix 22
AC4
E
116 127Right-handed alpha
Helix 23
AC5
E
128 130Right-handed 310
Helix 24
AC6
E
131 156Right-handed alpha
Helix 25
AC7
E
160 186Right-handed alpha
Helix 26
AC8
E
192 223Right-handed alpha
Helix 27
AC9
E
248 258Right-handed alpha
Helix 28
AD1
E
274 305Right-handed alpha
Helix 29
AD2
E
315 343Right-handed alpha
Helix 30
AD3
E
343 354Right-handed alpha
Helix 31
AD4
E
363 367Right-handed 310
Helix 32
AD5
E
369 377Right-handed alpha
Helix 33
AD6
E
378 389Right-handed alpha
Helix 34
AD7
E
389 396Right-handed alpha
Helix 35
AD8
E
399 424Right-handed alpha
Helix 36
AD9
E
428 448Right-handed alpha
Helix 37
AE1
E
450 463Right-handed alpha
Helix 38
AE2
E
464 481Right-handed alpha
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There are no sheets in PDB entry 6VP0
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