Analysis of interatomic Contacts of Structural Units in PDB entry:
6VST

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6VST entry

There are 5 chains in PDB entry 6VST (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 22	LYS 338
B	SER 21	LYS 338
C	SER 21	LYS 338
D	ASN 19	LYS 338
E	VAL 20	THR 38

There are168 helices in PDB entry 6VST. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	55	Right-handed alpha
Helix 2	AA2	A	76	79	Right-handed 310
Helix 3	AA3	A	80	90	Right-handed alpha
Helix 4	AA4	A	117	123	Right-handed alpha
Helix 5	AA5	A	127	145	Right-handed alpha
Helix 6	AA6	A	156	158	Right-handed 310
Helix 7	AA7	A	159	172	Right-handed alpha
Helix 8	AA8	A	199	207	Right-handed alpha
Helix 9	AA9	A	222	233	Right-handed alpha
Helix 10	AB1	A	241	250	Right-handed alpha
Helix 11	AB2	A	268	270	Right-handed 310
Helix 12	AB3	A	287	298	Right-handed alpha
Helix 13	AB4	A	311	315	Right-handed 310
Helix 14	AB5	A	319	337	Right-handed alpha
Helix 15	AB6	B	22	55	Right-handed alpha
Helix 16	AB7	B	76	79	Right-handed 310
Helix 17	AB8	B	80	90	Right-handed alpha
Helix 18	AB9	B	117	123	Right-handed alpha
Helix 19	AC1	B	127	144	Right-handed alpha
Helix 20	AC2	B	156	158	Right-handed 310
Helix 21	AC3	B	159	172	Right-handed alpha
Helix 22	AC4	B	199	208	Right-handed alpha
Helix 23	AC5	B	222	232	Right-handed alpha
Helix 24	AC6	B	241	250	Right-handed alpha
Helix 25	AC7	B	268	270	Right-handed 310
Helix 26	AC8	B	287	298	Right-handed alpha
Helix 27	AC9	B	311	315	Right-handed 310
Helix 28	AD1	B	319	337	Right-handed alpha
Helix 29	AD2	C	22	55	Right-handed alpha
Helix 30	AD3	C	76	79	Right-handed 310
Helix 31	AD4	C	80	90	Right-handed alpha
Helix 32	AD5	C	117	123	Right-handed alpha
Helix 33	AD6	C	127	144	Right-handed alpha
Helix 34	AD7	C	156	158	Right-handed 310
Helix 35	AD8	C	159	172	Right-handed alpha
Helix 36	AD9	C	199	207	Right-handed alpha
Helix 37	AE1	C	222	233	Right-handed alpha
Helix 38	AE2	C	241	250	Right-handed alpha
Helix 39	AE3	C	268	270	Right-handed 310
Helix 40	AE4	C	287	298	Right-handed alpha
Helix 41	AE5	C	311	315	Right-handed 310
Helix 42	AE6	C	319	337	Right-handed alpha
Helix 43	AE7	D	21	55	Right-handed alpha
Helix 44	AE8	D	76	79	Right-handed 310
Helix 45	AE9	D	80	90	Right-handed alpha
Helix 46	AF1	D	117	123	Right-handed alpha
Helix 47	AF2	D	127	145	Right-handed alpha
Helix 48	AF3	D	156	158	Right-handed 310
Helix 49	AF4	D	159	172	Right-handed alpha
Helix 50	AF5	D	199	208	Right-handed alpha
Helix 51	AF6	D	222	232	Right-handed alpha
Helix 52	AF7	D	241	250	Right-handed alpha
Helix 53	AF8	D	268	270	Right-handed 310
Helix 54	AF9	D	287	297	Right-handed alpha
Helix 55	AG1	D	311	315	Right-handed 310
Helix 56	AG2	D	319	337	Right-handed alpha
Helix 57	AG3	E	21	55	Right-handed alpha
Helix 58	AG4	E	76	79	Right-handed 310
Helix 59	AG5	E	80	90	Right-handed alpha
Helix 60	AG6	E	117	123	Right-handed alpha
Helix 61	AG7	E	127	144	Right-handed alpha
Helix 62	AG8	E	156	158	Right-handed 310
Helix 63	AG9	E	159	172	Right-handed alpha
Helix 64	AH1	E	199	208	Right-handed alpha
Helix 65	AH2	E	222	232	Right-handed alpha
Helix 66	AH3	E	241	250	Right-handed alpha
Helix 67	AH4	E	268	270	Right-handed 310
Helix 68	AH5	E	287	298	Right-handed alpha
Helix 69	AH6	E	311	315	Right-handed 310
Helix 70	AH7	E	319	337	Right-handed alpha
Helix 71	AH8	F	21	55	Right-handed alpha
Helix 72	AH9	F	76	79	Right-handed 310
Helix 73	AI1	F	80	89	Right-handed alpha
Helix 74	AI2	F	117	123	Right-handed alpha
Helix 75	AI3	F	127	144	Right-handed alpha
Helix 76	AI4	F	156	158	Right-handed 310
Helix 77	AI5	F	159	172	Right-handed alpha
Helix 78	AI6	F	199	207	Right-handed alpha
Helix 79	AI7	F	222	232	Right-handed alpha
Helix 80	AI8	F	241	250	Right-handed alpha
Helix 81	AI9	F	268	270	Right-handed 310
Helix 82	AJ1	F	287	298	Right-handed alpha
Helix 83	AJ2	F	311	315	Right-handed 310
Helix 84	AJ3	F	319	337	Right-handed alpha
Helix 85	AJ4	G	21	55	Right-handed alpha
Helix 86	AJ5	G	76	79	Right-handed 310
Helix 87	AJ6	G	80	90	Right-handed alpha
Helix 88	AJ7	G	117	123	Right-handed alpha
Helix 89	AJ8	G	127	144	Right-handed alpha
Helix 90	AJ9	G	156	158	Right-handed 310
Helix 91	AK1	G	159	172	Right-handed alpha
Helix 92	AK2	G	199	207	Right-handed alpha
Helix 93	AK3	G	222	232	Right-handed alpha
Helix 94	AK4	G	241	250	Right-handed alpha
Helix 95	AK5	G	268	270	Right-handed 310
Helix 96	AK6	G	287	298	Right-handed alpha
Helix 97	AK7	G	311	315	Right-handed 310
Helix 98	AK8	G	319	337	Right-handed alpha
Helix 99	AK9	H	21	55	Right-handed alpha
Helix 100	AL1	H	76	79	Right-handed 310
Helix 101	AL2	H	80	89	Right-handed alpha
Helix 102	AL3	H	117	123	Right-handed alpha
Helix 103	AL4	H	127	144	Right-handed alpha
Helix 104	AL5	H	156	158	Right-handed 310
Helix 105	AL6	H	159	172	Right-handed alpha
Helix 106	AL7	H	199	208	Right-handed alpha
Helix 107	AL8	H	222	233	Right-handed alpha
Helix 108	AL9	H	241	250	Right-handed alpha
Helix 109	AM1	H	268	270	Right-handed 310
Helix 110	AM2	H	287	298	Right-handed alpha
Helix 111	AM3	H	311	315	Right-handed 310
Helix 112	AM4	H	319	337	Right-handed alpha
Helix 113	AM5	I	23	55	Right-handed alpha
Helix 114	AM6	I	76	79	Right-handed 310
Helix 115	AM7	I	80	90	Right-handed alpha
Helix 116	AM8	I	117	123	Right-handed alpha
Helix 117	AM9	I	127	144	Right-handed alpha
Helix 118	AN1	I	156	158	Right-handed 310
Helix 119	AN2	I	159	172	Right-handed alpha
Helix 120	AN3	I	199	207	Right-handed alpha
Helix 121	AN4	I	222	233	Right-handed alpha
Helix 122	AN5	I	241	250	Right-handed alpha
Helix 123	AN6	I	268	270	Right-handed 310
Helix 124	AN7	I	287	298	Right-handed alpha
Helix 125	AN8	I	311	315	Right-handed 310
Helix 126	AN9	I	319	337	Right-handed alpha
Helix 127	AO1	J	22	55	Right-handed alpha
Helix 128	AO2	J	76	79	Right-handed 310
Helix 129	AO3	J	80	90	Right-handed alpha
Helix 130	AO4	J	117	123	Right-handed alpha
Helix 131	AO5	J	127	145	Right-handed alpha
Helix 132	AO6	J	156	158	Right-handed 310
Helix 133	AO7	J	159	172	Right-handed alpha
Helix 134	AO8	J	199	208	Right-handed alpha
Helix 135	AO9	J	222	233	Right-handed alpha
Helix 136	AP1	J	241	250	Right-handed alpha
Helix 137	AP2	J	268	270	Right-handed 310
Helix 138	AP3	J	287	298	Right-handed alpha
Helix 139	AP4	J	311	315	Right-handed 310
Helix 140	AP5	J	319	337	Right-handed alpha
Helix 141	AP6	K	23	55	Right-handed alpha
Helix 142	AP7	K	76	79	Right-handed 310
Helix 143	AP8	K	80	90	Right-handed alpha
Helix 144	AP9	K	117	123	Right-handed alpha
Helix 145	AQ1	K	127	145	Right-handed alpha
Helix 146	AQ2	K	156	158	Right-handed 310
Helix 147	AQ3	K	159	172	Right-handed alpha
Helix 148	AQ4	K	199	208	Right-handed alpha
Helix 149	AQ5	K	222	232	Right-handed alpha
Helix 150	AQ6	K	241	250	Right-handed alpha
Helix 151	AQ7	K	268	270	Right-handed 310
Helix 152	AQ8	K	287	297	Right-handed alpha
Helix 153	AQ9	K	311	315	Right-handed 310
Helix 154	AR1	K	319	337	Right-handed alpha
Helix 155	AR2	L	21	55	Right-handed alpha
Helix 156	AR3	L	76	79	Right-handed 310
Helix 157	AR4	L	80	90	Right-handed alpha
Helix 158	AR5	L	117	123	Right-handed alpha
Helix 159	AR6	L	127	145	Right-handed alpha
Helix 160	AR7	L	156	158	Right-handed 310
Helix 161	AR8	L	159	172	Right-handed alpha
Helix 162	AR9	L	199	208	Right-handed alpha
Helix 163	AS1	L	222	232	Right-handed alpha
Helix 164	AS2	L	241	250	Right-handed alpha
Helix 165	AS3	L	268	270	Right-handed 310
Helix 166	AS4	L	287	297	Right-handed alpha
Helix 167	AS5	L	311	315	Right-handed 310
Helix 168	AS6	L	319	337	Right-handed alpha

There are 12 sheets in PDB entry 6VST. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	115	first strand
Strand 2	A	60	65	parallel
Strand 3	A	148	153	parallel
Strand 4	A	302	308	parallel
Strand 5	A	261	266	parallel
Strand 6	A	175	180	parallel
Strand 7	A	210	218	parallel
Strand 8	A	235	238	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	115	first strand
Strand 2	B	60	66	parallel
Strand 3	B	148	154	parallel
Strand 4	B	302	308	parallel
Strand 5	B	261	266	parallel
Strand 6	B	175	180	parallel
Strand 7	B	210	218	parallel
Strand 8	B	235	238	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	115	first strand
Strand 2	C	60	66	parallel
Strand 3	C	148	154	parallel
Strand 4	C	302	308	parallel
Strand 5	C	261	266	parallel
Strand 6	C	175	180	parallel
Strand 7	C	210	218	parallel
Strand 8	C	235	238	parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	115	first strand
Strand 2	D	60	66	parallel
Strand 3	D	148	154	parallel
Strand 4	D	302	308	parallel
Strand 5	D	261	266	parallel
Strand 6	D	175	180	parallel
Strand 7	D	210	218	parallel
Strand 8	D	235	238	parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	110	115	first strand
Strand 2	E	60	66	parallel
Strand 3	E	148	154	parallel
Strand 4	E	302	308	parallel
Strand 5	E	261	266	parallel
Strand 6	E	175	180	parallel
Strand 7	E	210	218	parallel
Strand 8	E	235	238	parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	110	115	first strand
Strand 2	F	60	66	parallel
Strand 3	F	148	154	parallel
Strand 4	F	302	308	parallel
Strand 5	F	261	266	parallel
Strand 6	F	175	180	parallel
Strand 7	F	210	218	parallel
Strand 8	F	235	238	parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	110	115	first strand
Strand 2	G	60	65	parallel
Strand 3	G	148	153	parallel
Strand 4	G	302	308	parallel
Strand 5	G	261	266	parallel
Strand 6	G	175	180	parallel
Strand 7	G	210	218	parallel
Strand 8	G	235	238	parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	110	115	first strand
Strand 2	H	60	66	parallel
Strand 3	H	148	154	parallel
Strand 4	H	302	308	parallel
Strand 5	H	261	266	parallel
Strand 6	H	175	180	parallel
Strand 7	H	210	218	parallel
Strand 8	H	235	238	parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	110	115	first strand
Strand 2	I	60	66	parallel
Strand 3	I	148	154	parallel
Strand 4	I	302	308	parallel
Strand 5	I	261	266	parallel
Strand 6	I	175	180	parallel
Strand 7	I	210	218	parallel
Strand 8	I	235	238	parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	110	115	first strand
Strand 2	J	60	66	parallel
Strand 3	J	148	154	parallel
Strand 4	J	302	308	parallel
Strand 5	J	261	266	parallel
Strand 6	J	175	180	parallel
Strand 7	J	210	218	parallel
Strand 8	J	235	238	parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	110	115	first strand
Strand 2	K	60	66	parallel
Strand 3	K	148	154	parallel
Strand 4	K	302	308	parallel
Strand 5	K	261	266	parallel
Strand 6	K	175	180	parallel
Strand 7	K	210	218	parallel
Strand 8	K	235	238	parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	110	115	first strand
Strand 2	L	60	65	parallel
Strand 3	L	148	153	parallel
Strand 4	L	302	308	parallel
Strand 5	L	261	266	parallel
Strand 6	L	175	180	parallel
Strand 7	L	210	218	parallel
Strand 8	L	235	238	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6VST

Analysis of interatomic Contacts of Structural Units in PDB entry:
6VST