Analysis of interatomic Contacts of Structural Units in PDB entry:
6VSX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6VSX entry

There is 1 chain in PDB entry 6VSX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 608ALA 773
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6VSX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
610 619Right-handed alpha
Helix 2
AA2
A
620 622Right-handed 310
Helix 3
AA3
A
644 662Right-handed alpha
Helix 4
AA4
A
673 685Right-handed alpha
Helix 5
AA5
A
709 713Right-handed alpha
Helix 6
AA6
A
732 744Right-handed alpha
Helix 7
AA7
A
759 764Right-handed alpha
Helix 8
AA8
A
766 770Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6VSX.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
691 692first strand
Strand 2
A
703 708parallel
Strand 3
A
666 671parallel
Strand 4
A
717 722parallel
Strand 5
A
746 755parallel
Strand 6
A
638 642parallel
Strand 7
A
771 773parallel
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