Analysis of interatomic Contacts of Structural Units in PDB entry:
6VU0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6VU0 entry

There are 2 chains in PDB entry 6VU0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 261GLU 571
B
 ALA 261ILE 569
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6VU0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
277 287Right-handed alpha
Helix 2
AA2
A
297 302Right-handed alpha
Helix 3
AA3
A
309 325Right-handed alpha
Helix 4
AA4
A
342 346Right-handed 310
Helix 5
AA5
A
352 356Right-handed 310
Helix 6
AA6
A
359 366Right-handed alpha
Helix 7
AA7
A
366 381Right-handed alpha
Helix 8
AA8
A
382 384Right-handed 310
Helix 9
AA9
A
395 417Right-handed alpha
Helix 10
AB1
A
432 438Right-handed alpha
Helix 11
AB2
A
438 444Right-handed alpha
Helix 12
AB3
A
452 462Right-handed alpha
Helix 13
AB4
A
470 474Right-handed 310
Helix 14
AB5
A
478 495Right-handed alpha
Helix 15
AB6
A
503 507Right-handed 310
Helix 16
AB7
A
508 518Right-handed alpha
Helix 17
AB8
A
529 539Right-handed alpha
Helix 18
AB9
A
541 553Right-handed alpha
Helix 19
AC1
A
557 570Right-handed alpha
Helix 20
AC2
B
280 287Right-handed alpha
Helix 21
AC3
B
297 302Right-handed alpha
Helix 22
AC4
B
309 325Right-handed alpha
Helix 23
AC5
B
342 346Right-handed 310
Helix 24
AC6
B
352 356Right-handed 310
Helix 25
AC7
B
358 366Right-handed alpha
Helix 26
AC8
B
367 381Right-handed alpha
Helix 27
AC9
B
382 384Right-handed 310
Helix 28
AD1
B
395 416Right-handed alpha
Helix 29
AD2
B
432 438Right-handed alpha
Helix 30
AD3
B
438 444Right-handed alpha
Helix 31
AD4
B
452 462Right-handed alpha
Helix 32
AD5
B
470 474Right-handed 310
Helix 33
AD6
B
478 495Right-handed alpha
Helix 34
AD7
B
503 507Right-handed 310
Helix 35
AD8
B
508 518Right-handed alpha
Helix 36
AD9
B
529 539Right-handed alpha
Helix 37
AE1
B
541 553Right-handed alpha
Helix 38
AE2
B
557 569Right-handed alpha
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There are 2 sheets in PDB entry 6VU0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 275first strand
Strand 2
A
292 296parallel
Strand 3
A
328 332parallel
Strand 4
A
385 390parallel
Strand 5
A
425 428parallel
Strand 6
A
448 450parallel
Strand 7
A
498 501parallel
Strand 8
A
522 526parallel
Strand 9
A
270 275parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 275first strand
Strand 2
B
292 296parallel
Strand 3
B
328 332parallel
Strand 4
B
385 390parallel
Strand 5
B
425 428parallel
Strand 6
B
448 451parallel
Strand 7
B
498 501parallel
Strand 8
B
522 525parallel
Strand 9
B
270 275parallel
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