Analysis of interatomic Contacts of Structural Units in PDB entry:
6VUM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6VUM entry

There are 4 chains in PDB entry 6VUM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 118GLN 526
B
 GLN 118GLN 526
C
 GLN 118GLN 526
D
 GLN 118GLN 526
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 6VUM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
127 133Right-handed alpha
Helix 2
AA2
A
137 164Right-handed alpha
Helix 3
AA3
A
172 178Right-handed alpha
Helix 4
AA4
A
181 205Right-handed alpha
Helix 5
AA5
A
208 213Right-handed alpha
Helix 6
AA6
A
218 235Right-handed alpha
Helix 7
AA7
A
237 246Right-handed alpha
Helix 8
AA8
A
252 284Right-handed alpha
Helix 9
AA9
A
294 303Right-handed alpha
Helix 10
AB1
A
320 344Right-handed alpha
Helix 11
AB2
A
345 351Right-handed alpha
Helix 12
AB3
A
360 369Right-handed alpha
Helix 13
AB4
A
369 385Right-handed alpha
Helix 14
AB5
A
386 396Right-handed alpha
Helix 15
AB6
A
415 421Right-handed alpha
Helix 16
AB7
A
421 432Right-handed alpha
Helix 17
AB8
A
432 440Right-handed alpha
Helix 18
AB9
A
446 468Right-handed alpha
Helix 19
AC1
A
473 489Right-handed alpha
Helix 20
AC2
A
497 525Right-handed alpha
Helix 21
AC3
B
127 133Right-handed alpha
Helix 22
AC4
B
138 164Right-handed alpha
Helix 23
AC5
B
172 178Right-handed alpha
Helix 24
AC6
B
180 205Right-handed alpha
Helix 25
AC7
B
206 208Right-handed 310
Helix 26
AC8
B
217 236Right-handed alpha
Helix 27
AC9
B
237 246Right-handed alpha
Helix 28
AD1
B
249 282Right-handed alpha
Helix 29
AD2
B
293 303Right-handed alpha
Helix 30
AD3
B
320 344Right-handed alpha
Helix 31
AD4
B
360 369Right-handed alpha
Helix 32
AD5
B
369 385Right-handed alpha
Helix 33
AD6
B
385 396Right-handed alpha
Helix 34
AD7
B
415 421Right-handed alpha
Helix 35
AD8
B
422 432Right-handed alpha
Helix 36
AD9
B
432 440Right-handed alpha
Helix 37
AE1
B
446 469Right-handed alpha
Helix 38
AE2
B
473 489Right-handed alpha
Helix 39
AE3
B
497 525Right-handed alpha
Helix 40
AE4
C
127 133Right-handed alpha
Helix 41
AE5
C
137 164Right-handed alpha
Helix 42
AE6
C
172 178Right-handed alpha
Helix 43
AE7
C
181 205Right-handed alpha
Helix 44
AE8
C
208 213Right-handed alpha
Helix 45
AE9
C
218 235Right-handed alpha
Helix 46
AF1
C
237 246Right-handed alpha
Helix 47
AF2
C
252 284Right-handed alpha
Helix 48
AF3
C
294 303Right-handed alpha
Helix 49
AF4
C
320 344Right-handed alpha
Helix 50
AF5
C
345 351Right-handed alpha
Helix 51
AF6
C
360 369Right-handed alpha
Helix 52
AF7
C
369 385Right-handed alpha
Helix 53
AF8
C
386 396Right-handed alpha
Helix 54
AF9
C
415 421Right-handed alpha
Helix 55
AG1
C
421 432Right-handed alpha
Helix 56
AG2
C
432 440Right-handed alpha
Helix 57
AG3
C
446 468Right-handed alpha
Helix 58
AG4
C
473 489Right-handed alpha
Helix 59
AG5
C
497 525Right-handed alpha
Helix 60
AG6
D
127 133Right-handed alpha
Helix 61
AG7
D
138 164Right-handed alpha
Helix 62
AG8
D
172 178Right-handed alpha
Helix 63
AG9
D
180 205Right-handed alpha
Helix 64
AH1
D
206 208Right-handed 310
Helix 65
AH2
D
217 236Right-handed alpha
Helix 66
AH3
D
237 246Right-handed alpha
Helix 67
AH4
D
249 282Right-handed alpha
Helix 68
AH5
D
293 303Right-handed alpha
Helix 69
AH6
D
320 344Right-handed alpha
Helix 70
AH7
D
360 369Right-handed alpha
Helix 71
AH8
D
369 385Right-handed alpha
Helix 72
AH9
D
385 396Right-handed alpha
Helix 73
AI1
D
415 421Right-handed alpha
Helix 74
AI2
D
422 432Right-handed alpha
Helix 75
AI3
D
432 440Right-handed alpha
Helix 76
AI4
D
446 469Right-handed alpha
Helix 77
AI5
D
473 489Right-handed alpha
Helix 78
AI6
D
497 525Right-handed alpha
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There are no sheets in PDB entry 6VUM
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