Analysis of interatomic Contacts of Structural Units in PDB entry:
6VYI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6VYI entry

There are 2 chains in PDB entry 6VYI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 66TYR 481
B
 LEU 66TYR 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6VYI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
77 81Right-handed 310
Helix 2
AA2
A
87 113Right-handed alpha
Helix 3
AA3
A
115 127Right-handed alpha
Helix 4
AA4
A
131 155Right-handed alpha
Helix 5
AA5
A
160 185Right-handed alpha
Helix 6
AA6
A
190 226Right-handed alpha
Helix 7
AA7
A
248 257Right-handed alpha
Helix 8
AA8
A
274 300Right-handed alpha
Helix 9
AA9
A
300 307Right-handed alpha
Helix 10
AB1
A
315 343Right-handed alpha
Helix 11
AB2
A
343 353Right-handed alpha
Helix 12
AB3
A
369 375Right-handed alpha
Helix 13
AB4
A
378 389Right-handed alpha
Helix 14
AB5
A
390 396Right-handed alpha
Helix 15
AB6
A
399 420Right-handed alpha
Helix 16
AB7
A
428 448Right-handed alpha
Helix 17
AB8
A
449 463Right-handed alpha
Helix 18
AB9
A
465 479Right-handed alpha
Helix 19
AC1
B
77 81Right-handed 310
Helix 20
AC2
B
87 113Right-handed alpha
Helix 21
AC3
B
115 127Right-handed alpha
Helix 22
AC4
B
131 155Right-handed alpha
Helix 23
AC5
B
160 185Right-handed alpha
Helix 24
AC6
B
190 226Right-handed alpha
Helix 25
AC7
B
248 257Right-handed alpha
Helix 26
AC8
B
274 300Right-handed alpha
Helix 27
AC9
B
300 307Right-handed alpha
Helix 28
AD1
B
315 343Right-handed alpha
Helix 29
AD2
B
343 353Right-handed alpha
Helix 30
AD3
B
369 375Right-handed alpha
Helix 31
AD4
B
378 389Right-handed alpha
Helix 32
AD5
B
390 396Right-handed alpha
Helix 33
AD6
B
399 420Right-handed alpha
Helix 34
AD7
B
428 448Right-handed alpha
Helix 35
AD8
B
449 463Right-handed alpha
Helix 36
AD9
B
465 479Right-handed alpha
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There are no sheets in PDB entry 6VYI
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