Analysis of interatomic Contacts of Structural Units in PDB entry:
6VZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6VZZ entry

There is 1 chain in PDB entry 6VZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2GLY 380
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6VZZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 15Right-handed alpha
Helix 2
AA2
A
16 20Right-handed 310
Helix 3
AA3
A
60 80Right-handed alpha
Helix 4
AA4
A
109 113Right-handed alpha
Helix 5
AA5
A
118 120Right-handed 310
Helix 6
AA6
A
135 149Right-handed alpha
Helix 7
AA7
A
151 154Right-handed 310
Helix 8
AA8
A
207 211Right-handed 310
Helix 9
AA9
A
222 239Right-handed alpha
Helix 10
AB1
A
245 249Right-handed 310
Helix 11
AB2
A
251 266Right-handed alpha
Helix 12
AB3
A
272 276Right-handed 310
Helix 13
AB4
A
277 285Right-handed alpha
Helix 14
AB5
A
291 317Right-handed alpha
Helix 15
AB6
A
325 330Right-handed alpha
Helix 16
AB7
A
331 338Right-handed alpha
Helix 17
AB8
A
338 347Right-handed alpha
Helix 18
AB9
A
351 356Right-handed alpha
Helix 19
AC1
A
368 379Right-handed alpha
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There are 3 sheets in PDB entry 6VZZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 57first strand
Strand 2
A
36 43anti-parallel
Strand 3
A
26 32anti-parallel
Strand 4
A
85 90parallel
Strand 5
A
130 134parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 94first strand
Strand 2
A
100 103anti-parallel
Strand 3
A
114 116anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 160first strand
Strand 2
A
359 363anti-parallel
Strand 3
A
320 324parallel
Strand 4
A
175 180parallel
Strand 5
A
184 190anti-parallel
Strand 6
A
202 205anti-parallel
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