Analysis of interatomic Contacts of Structural Units in PDB entry:
6W04


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6W04 entry

There is 1 chain in PDB entry 6W04 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 223
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6W04. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 32Right-handed alpha
Helix 2
AA2
A
36 44Right-handed alpha
Helix 3
AA3
A
47 57Right-handed alpha
Helix 4
AA4
A
61 83Right-handed alpha
Helix 5
AA5
A
90 101Right-handed alpha
Helix 6
AA6
A
113 124Right-handed alpha
Helix 7
AA7
A
125 128Right-handed 310
Helix 8
AA8
A
130 134Right-handed 310
Helix 9
AA9
A
147 158Right-handed alpha
Helix 10
AB1
A
160 162Right-handed 310
Helix 11
AB2
A
170 181Right-handed alpha
Helix 12
AB3
A
192 198Right-handed alpha
Helix 13
AB4
A
208 212Right-handed 310
Helix 14
AB5
A
213 223Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6W04.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 137first strand
Strand 2
A
105 112parallel
Strand 3
A
3 7parallel
Strand 4
A
164 168parallel
Strand 5
A
183 187parallel
Strand 6
A
205 206parallel
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