Analysis of interatomic Contacts of Structural Units in PDB entry:
6W0P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6W0P entry

There are 2 chains in PDB entry 6W0P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ARG 752
B	ILE 2	ARG 458

There are112 helices in PDB entry 6W0P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	24	Right-handed 310
Helix 2	AA2	A	25	33	Right-handed alpha
Helix 3	AA3	A	262	278	Right-handed alpha
Helix 4	AA4	A	281	301	Right-handed alpha
Helix 5	AA5	A	307	325	Right-handed alpha
Helix 6	AA6	A	350	355	Right-handed alpha
Helix 7	AA7	A	356	362	Right-handed alpha
Helix 8	AA8	A	364	377	Right-handed alpha
Helix 9	AA9	A	378	389	Right-handed alpha
Helix 10	AB1	A	409	414	Right-handed alpha
Helix 11	AB2	A	417	435	Right-handed alpha
Helix 12	AB3	A	436	443	Right-handed alpha
Helix 13	AB4	A	443	459	Right-handed alpha
Helix 14	AB5	A	486	505	Right-handed alpha
Helix 15	AB6	A	512	519	Right-handed alpha
Helix 16	AB7	A	521	535	Right-handed alpha
Helix 17	AB8	A	559	563	Right-handed 310
Helix 18	AB9	A	564	568	Right-handed 310
Helix 19	AC1	A	569	573	Right-handed 310
Helix 20	AC2	A	577	582	Right-handed 310
Helix 21	AC3	A	589	597	Right-handed alpha
Helix 22	AC4	A	598	601	Right-handed 310
Helix 23	AC5	A	602	614	Right-handed alpha
Helix 24	AC6	A	615	617	Right-handed 310
Helix 25	AC7	A	623	635	Right-handed alpha
Helix 26	AC8	A	637	646	Right-handed alpha
Helix 27	AC9	A	659	663	Right-handed 310
Helix 28	AD1	A	665	678	Right-handed alpha
Helix 29	AD2	B	22	24	Right-handed 310
Helix 30	AD3	B	25	33	Right-handed alpha
Helix 31	AD4	B	262	279	Right-handed alpha
Helix 32	AD5	B	281	301	Right-handed alpha
Helix 33	AD6	B	307	325	Right-handed alpha
Helix 34	AD7	B	350	355	Right-handed alpha
Helix 35	AD8	B	356	362	Right-handed alpha
Helix 36	AD9	B	364	377	Right-handed alpha
Helix 37	AE1	B	378	389	Right-handed alpha
Helix 38	AE2	B	409	414	Right-handed alpha
Helix 39	AE3	B	417	435	Right-handed alpha
Helix 40	AE4	B	436	443	Right-handed alpha
Helix 41	AE5	B	443	459	Right-handed alpha
Helix 42	AE6	B	486	506	Right-handed alpha
Helix 43	AE7	B	511	519	Right-handed alpha
Helix 44	AE8	B	521	535	Right-handed alpha
Helix 45	AE9	B	559	563	Right-handed 310
Helix 46	AF1	B	564	568	Right-handed 310
Helix 47	AF2	B	569	573	Right-handed 310
Helix 48	AF3	B	577	582	Right-handed 310
Helix 49	AF4	B	589	597	Right-handed alpha
Helix 50	AF5	B	598	601	Right-handed 310
Helix 51	AF6	B	602	614	Right-handed alpha
Helix 52	AF7	B	615	617	Right-handed 310
Helix 53	AF8	B	623	635	Right-handed alpha
Helix 54	AF9	B	637	646	Right-handed alpha
Helix 55	AG1	B	659	663	Right-handed 310
Helix 56	AG2	B	665	678	Right-handed alpha
Helix 57	AG3	C	25	33	Right-handed alpha
Helix 58	AG4	C	262	279	Right-handed alpha
Helix 59	AG5	C	281	301	Right-handed alpha
Helix 60	AG6	C	307	325	Right-handed alpha
Helix 61	AG7	C	342	347	Right-handed 310
Helix 62	AG8	C	350	355	Right-handed alpha
Helix 63	AG9	C	356	362	Right-handed alpha
Helix 64	AH1	C	364	377	Right-handed alpha
Helix 65	AH2	C	378	389	Right-handed alpha
Helix 66	AH3	C	409	414	Right-handed alpha
Helix 67	AH4	C	417	435	Right-handed alpha
Helix 68	AH5	C	436	443	Right-handed alpha
Helix 69	AH6	C	443	459	Right-handed alpha
Helix 70	AH7	C	486	506	Right-handed alpha
Helix 71	AH8	C	510	519	Right-handed alpha
Helix 72	AH9	C	521	535	Right-handed alpha
Helix 73	AI1	C	559	563	Right-handed 310
Helix 74	AI2	C	569	573	Right-handed 310
Helix 75	AI3	C	575	582	Right-handed 310
Helix 76	AI4	C	589	597	Right-handed alpha
Helix 77	AI5	C	598	601	Right-handed 310
Helix 78	AI6	C	602	614	Right-handed alpha
Helix 79	AI7	C	615	617	Right-handed 310
Helix 80	AI8	C	623	635	Right-handed alpha
Helix 81	AI9	C	637	646	Right-handed alpha
Helix 82	AJ1	C	647	651	Right-handed 310
Helix 83	AJ2	C	659	663	Right-handed 310
Helix 84	AJ3	C	665	678	Right-handed alpha
Helix 85	AJ4	D	22	24	Right-handed 310
Helix 86	AJ5	D	25	33	Right-handed alpha
Helix 87	AJ6	D	262	279	Right-handed alpha
Helix 88	AJ7	D	281	301	Right-handed alpha
Helix 89	AJ8	D	307	325	Right-handed alpha
Helix 90	AJ9	D	342	347	Right-handed 310
Helix 91	AK1	D	350	355	Right-handed alpha
Helix 92	AK2	D	356	362	Right-handed alpha
Helix 93	AK3	D	364	377	Right-handed alpha
Helix 94	AK4	D	378	389	Right-handed alpha
Helix 95	AK5	D	409	414	Right-handed alpha
Helix 96	AK6	D	417	435	Right-handed alpha
Helix 97	AK7	D	436	443	Right-handed alpha
Helix 98	AK8	D	443	459	Right-handed alpha
Helix 99	AK9	D	486	505	Right-handed alpha
Helix 100	AL1	D	511	518	Right-handed alpha
Helix 101	AL2	D	521	535	Right-handed alpha
Helix 102	AL3	D	559	563	Right-handed 310
Helix 103	AL4	D	569	573	Right-handed 310
Helix 104	AL5	D	575	580	Right-handed 310
Helix 105	AL6	D	589	597	Right-handed alpha
Helix 106	AL7	D	598	601	Right-handed 310
Helix 107	AL8	D	602	614	Right-handed alpha
Helix 108	AL9	D	615	617	Right-handed 310
Helix 109	AM1	D	623	636	Right-handed alpha
Helix 110	AM2	D	637	646	Right-handed alpha
Helix 111	AM3	D	647	651	Right-handed 310
Helix 112	AM4	D	665	678	Right-handed alpha

There are 30 sheets in PDB entry 6W0P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	11	first strand
Strand 2	A	15	19	anti-parallel
Strand 3	A	109	118	anti-parallel
Strand 4	A	124	132	anti-parallel
Strand 5	A	135	145	anti-parallel
Strand 6	A	152	161	anti-parallel
Strand 7	A	245	256	anti-parallel
Strand 8	A	210	217	anti-parallel
Strand 9	A	197	204	anti-parallel
Strand 10	A	186	194	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	36	first strand
Strand 2	A	40	42	anti-parallel
Strand 3	A	58	60	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	66	first strand
Strand 2	A	83	85	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	101	102	first strand
Strand 2	A	94	98	anti-parallel
Strand 3	A	165	174	anti-parallel
Strand 4	A	230	239	anti-parallel
Strand 5	A	223	227	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	303	305	first strand
Strand 2	A	702	709	anti-parallel
Strand 3	A	712	718	anti-parallel
Strand 4	A	722	726	anti-parallel
Strand 5	A	747	751	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	460	461	first strand
Strand 2	A	468	469	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	684	686	first strand
Strand 2	A	689	692	anti-parallel
Strand 3	A	733	737	parallel
Strand 4	A	740	744	anti-parallel

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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	11	first strand
Strand 2	B	15	19	anti-parallel
Strand 3	B	109	118	anti-parallel
Strand 4	B	124	132	anti-parallel
Strand 5	B	135	145	anti-parallel
Strand 6	B	152	161	anti-parallel
Strand 7	B	245	256	anti-parallel
Strand 8	B	210	217	anti-parallel
Strand 9	B	197	204	anti-parallel
Strand 10	B	186	194	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	36	first strand
Strand 2	B	40	42	anti-parallel
Strand 3	B	58	60	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	66	first strand
Strand 2	B	83	85	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	102	first strand
Strand 2	B	94	98	anti-parallel
Strand 3	B	165	174	anti-parallel
Strand 4	B	230	239	anti-parallel
Strand 5	B	223	227	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	303	305	first strand
Strand 2	B	702	709	anti-parallel
Strand 3	B	712	718	anti-parallel
Strand 4	B	722	726	anti-parallel
Strand 5	B	747	751	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	460	461	first strand
Strand 2	B	468	469	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	471	473	first strand
Strand 2	B	483	484	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	684	686	first strand
Strand 2	B	689	692	anti-parallel
Strand 3	B	733	737	parallel
Strand 4	B	740	744	anti-parallel

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There are 9 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	19	first strand
Strand 2	C	114	118	anti-parallel
Strand 3	C	124	128	anti-parallel
Strand 4	C	139	145	anti-parallel
Strand 5	C	152	159	anti-parallel
Strand 6	C	245	256	anti-parallel
Strand 7	C	210	217	anti-parallel
Strand 8	C	197	203	anti-parallel
Strand 9	C	192	194	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	36	first strand
Strand 2	C	40	42	anti-parallel
Strand 3	C	58	60	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	64	66	first strand
Strand 2	C	83	85	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	94	97	first strand
Strand 2	C	168	171	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	303	305	first strand
Strand 2	C	702	709	anti-parallel
Strand 3	C	712	718	anti-parallel
Strand 4	C	722	726	anti-parallel
Strand 5	C	747	751	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	460	461	first strand
Strand 2	C	468	469	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	684	686	first strand
Strand 2	C	689	692	anti-parallel
Strand 3	C	733	737	parallel
Strand 4	C	740	744	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	12	first strand
Strand 2	D	15	18	anti-parallel
Strand 3	D	115	118	anti-parallel
Strand 4	D	124	126	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	36	first strand
Strand 2	D	40	42	anti-parallel
Strand 3	D	58	60	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	66	first strand
Strand 2	D	83	85	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	144	145	first strand
Strand 2	D	152	154	anti-parallel
Strand 3	D	250	256	anti-parallel
Strand 4	D	210	216	anti-parallel
Strand 5	D	197	204	anti-parallel
Strand 6	D	186	194	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	303	305	first strand
Strand 2	D	702	709	anti-parallel
Strand 3	D	712	718	anti-parallel
Strand 4	D	722	726	anti-parallel
Strand 5	D	747	751	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	460	461	first strand
Strand 2	D	468	469	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	471	473	first strand
Strand 2	D	483	484	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	684	686	first strand
Strand 2	D	689	692	anti-parallel
Strand 3	D	733	737	parallel
Strand 4	D	740	744	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6W0P

Analysis of interatomic Contacts of Structural Units in PDB entry:
6W0P