Analysis of interatomic Contacts of Structural Units in PDB entry:
6W17

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6W17 entry

There are 31 chains in PDB entry 6W17 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	TYR 420
B	SER 3	PRO 387
C	ALA 2	LEU 377
D	MET 1	ASP 301
E	MET 1	LEU 174
F	MET 1	PHE 168
G	PHE 3	LEU 152
H	GLY 235	GLU 366
I	THR 5	GLU 72
I	GLY 74	PHE 375
J	THR 5	GLU 72
J	GLY 74	CYS 374
K	THR 5	GLU 72
K	GLY 74	CYS 374
L	THR 5	GLU 72
L	GLY 74	CYS 374
M	ALA 2	TRP 3
M	ALA 5	ALA 5
M	CYS 7	CYS 7
N	ALA 2	TRP 3
N	ALA 5	ALA 5
N	CYS 7	CYS 7
O	ALA 2	TRP 3
O	ALA 5	ALA 5
O	CYS 7	CYS 7
P	ALA 2	TRP 3
P	ALA 5	ALA 5
P	CYS 7	CYS 7
Q	ALA 2	TRP 3
Q	ALA 5	ALA 5
Q	CYS 7	CYS 7

There are138 helices in PDB entry 6W17. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	77	83	Right-handed alpha
Helix 2	AA2	A	101	115	Right-handed alpha
Helix 3	AA3	A	135	148	Right-handed alpha
Helix 4	AA4	A	159	167	Right-handed alpha
Helix 5	AA5	A	213	228	Right-handed alpha
Helix 6	AA6	A	234	245	Right-handed alpha
Helix 7	AA7	A	255	261	Right-handed alpha
Helix 8	AA8	A	262	265	Right-handed 310
Helix 9	AA9	A	284	289	Right-handed alpha
Helix 10	AB1	A	290	293	Right-handed 310
Helix 11	AB2	A	306	318	Right-handed alpha
Helix 12	AB3	A	319	321	Right-handed 310
Helix 13	AB4	A	322	327	Right-handed alpha
Helix 14	AB5	A	334	338	Right-handed 310
Helix 15	AB6	A	341	366	Right-handed alpha
Helix 16	AB7	A	384	395	Right-handed alpha
Helix 17	AB8	A	397	403	Right-handed alpha
Helix 18	AB9	A	406	413	Right-handed alpha
Helix 19	AC1	B	55	59	Right-handed 310
Helix 20	AC2	B	78	92	Right-handed alpha
Helix 21	AC3	B	112	126	Right-handed alpha
Helix 22	AC4	B	137	146	Right-handed alpha
Helix 23	AC5	B	182	197	Right-handed alpha
Helix 24	AC6	B	205	216	Right-handed alpha
Helix 25	AC7	B	222	233	Right-handed alpha
Helix 26	AC8	B	252	263	Right-handed alpha
Helix 27	AC9	B	263	268	Right-handed alpha
Helix 28	AD1	B	274	284	Right-handed alpha
Helix 29	AD2	B	286	295	Right-handed alpha
Helix 30	AD3	B	301	306	Right-handed 310
Helix 31	AD4	B	308	325	Right-handed alpha
Helix 32	AD5	B	345	347	Right-handed 310
Helix 33	AD6	B	348	362	Right-handed alpha
Helix 34	AD7	B	377	383	Right-handed alpha
Helix 35	AD8	D	8	21	Right-handed alpha
Helix 36	AD9	D	58	66	Right-handed alpha
Helix 37	AE1	D	67	75	Right-handed alpha
Helix 38	AE2	D	101	113	Right-handed alpha
Helix 39	AE3	D	113	119	Right-handed alpha
Helix 40	AE4	D	120	139	Right-handed alpha
Helix 41	AE5	D	143	152	Right-handed alpha
Helix 42	AE6	D	186	202	Right-handed alpha
Helix 43	AE7	D	206	210	Right-handed 310
Helix 44	AE8	D	254	299	Right-handed alpha
Helix 45	AE9	E	42	55	Right-handed alpha
Helix 46	AF1	E	64	84	Right-handed alpha
Helix 47	AF2	E	88	101	Right-handed alpha
Helix 48	AF3	E	126	149	Right-handed alpha
Helix 49	AF4	E	158	164	Right-handed alpha
Helix 50	AF5	E	168	172	Right-handed 310
Helix 51	AF6	F	4	20	Right-handed alpha
Helix 52	AF7	F	36	41	Right-handed alpha
Helix 53	AF8	F	80	97	Right-handed alpha
Helix 54	AF9	F	120	126	Right-handed alpha
Helix 55	AG1	F	128	168	Right-handed alpha
Helix 56	AG2	G	34	50	Right-handed alpha
Helix 57	AG3	G	51	60	Right-handed alpha
Helix 58	AG4	G	70	86	Right-handed alpha
Helix 59	AG5	G	91	98	Right-handed alpha
Helix 60	AG6	G	100	116	Right-handed alpha
Helix 61	AG7	G	123	137	Right-handed alpha
Helix 62	AG8	G	138	147	Right-handed alpha
Helix 63	AG9	H	236	248	Right-handed alpha
Helix 64	AH1	H	252	266	Right-handed alpha
Helix 65	AH2	H	275	292	Right-handed alpha
Helix 66	AH3	H	299	309	Right-handed alpha
Helix 67	AH4	H	325	338	Right-handed alpha
Helix 68	AH5	H	344	359	Right-handed alpha
Helix 69	AH6	I	55	61	Right-handed alpha
Helix 70	AH7	I	78	92	Right-handed alpha
Helix 71	AH8	I	97	101	Right-handed 310
Helix 72	AH9	I	112	127	Right-handed alpha
Helix 73	AI1	I	138	146	Right-handed alpha
Helix 74	AI2	I	172	175	Right-handed 310
Helix 75	AI3	I	181	197	Right-handed alpha
Helix 76	AI4	I	202	216	Right-handed alpha
Helix 77	AI5	I	222	233	Right-handed alpha
Helix 78	AI6	I	252	257	Right-handed alpha
Helix 79	AI7	I	258	263	Right-handed alpha
Helix 80	AI8	I	273	285	Right-handed alpha
Helix 81	AI9	I	286	294	Right-handed alpha
Helix 82	AJ1	I	308	321	Right-handed alpha
Helix 83	AJ2	I	337	349	Right-handed alpha
Helix 84	AJ3	I	351	356	Right-handed alpha
Helix 85	AJ4	I	358	366	Right-handed alpha
Helix 86	AJ5	I	369	374	Right-handed alpha
Helix 87	AJ6	J	55	61	Right-handed alpha
Helix 88	AJ7	J	78	92	Right-handed alpha
Helix 89	AJ8	J	97	101	Right-handed 310
Helix 90	AJ9	J	112	126	Right-handed alpha
Helix 91	AK1	J	136	146	Right-handed alpha
Helix 92	AK2	J	182	197	Right-handed alpha
Helix 93	AK3	J	202	216	Right-handed alpha
Helix 94	AK4	J	222	233	Right-handed alpha
Helix 95	AK5	J	252	263	Right-handed alpha
Helix 96	AK6	J	264	267	Right-handed 310
Helix 97	AK7	J	273	285	Right-handed alpha
Helix 98	AK8	J	286	296	Right-handed alpha
Helix 99	AK9	J	302	306	Right-handed 310
Helix 100	AL1	J	308	321	Right-handed alpha
Helix 101	AL2	J	334	336	Right-handed 310
Helix 102	AL3	J	337	349	Right-handed alpha
Helix 103	AL4	J	350	356	Right-handed 310
Helix 104	AL5	J	359	366	Right-handed alpha
Helix 105	AL6	J	368	374	Right-handed alpha
Helix 106	AL7	K	55	61	Right-handed alpha
Helix 107	AL8	K	78	92	Right-handed alpha
Helix 108	AL9	K	112	126	Right-handed alpha
Helix 109	AM1	K	137	146	Right-handed alpha
Helix 110	AM2	K	172	175	Right-handed 310
Helix 111	AM3	K	181	197	Right-handed alpha
Helix 112	AM4	K	202	217	Right-handed alpha
Helix 113	AM5	K	222	233	Right-handed alpha
Helix 114	AM6	K	252	263	Right-handed alpha
Helix 115	AM7	K	273	284	Right-handed alpha
Helix 116	AM8	K	286	296	Right-handed alpha
Helix 117	AM9	K	302	306	Right-handed 310
Helix 118	AN1	K	308	321	Right-handed alpha
Helix 119	AN2	K	337	349	Right-handed alpha
Helix 120	AN3	K	350	355	Right-handed alpha
Helix 121	AN4	K	359	365	Right-handed alpha
Helix 122	AN5	K	368	374	Right-handed alpha
Helix 123	AN6	L	56	61	Right-handed alpha
Helix 124	AN7	L	78	92	Right-handed alpha
Helix 125	AN8	L	112	126	Right-handed alpha
Helix 126	AN9	L	136	146	Right-handed alpha
Helix 127	AO1	L	181	197	Right-handed alpha
Helix 128	AO2	L	202	217	Right-handed alpha
Helix 129	AO3	L	222	233	Right-handed alpha
Helix 130	AO4	L	252	263	Right-handed alpha
Helix 131	AO5	L	263	268	Right-handed alpha
Helix 132	AO6	L	273	284	Right-handed alpha
Helix 133	AO7	L	286	296	Right-handed alpha
Helix 134	AO8	L	308	321	Right-handed alpha
Helix 135	AO9	L	337	349	Right-handed alpha
Helix 136	AP1	L	351	356	Right-handed 310
Helix 137	AP2	L	359	366	Right-handed alpha
Helix 138	AP3	L	367	372	Right-handed 310

There are 48 sheets in PDB entry 6W17. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	31	first strand
Strand 2	A	17	21	anti-parallel
Strand 3	A	8	11	anti-parallel
Strand 4	A	126	129	parallel
Strand 5	A	154	158	parallel
Strand 6	A	404	405	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	36	first strand
Strand 2	A	75	76	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	95	first strand
Strand 2	A	98	99	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	209	first strand
Strand 2	A	191	194	anti-parallel
Strand 3	A	183	186	anti-parallel
Strand 4	A	330	333	parallel
Strand 5	A	376	377	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	269	first strand
Strand 2	A	279	281	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	30	first strand
Strand 2	B	14	19	anti-parallel
Strand 3	B	6	8	anti-parallel
Strand 4	B	103	104	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	107	first strand
Strand 2	B	135	136	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	178	first strand
Strand 2	B	160	165	anti-parallel
Strand 3	B	150	155	anti-parallel
Strand 4	B	297	300	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	238	241	first strand
Strand 2	B	247	250	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	8	first strand
Strand 2	C	370	376	anti-parallel
Strand 3	C	362	367	anti-parallel
Strand 4	C	347	352	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	29	first strand
Strand 2	C	35	41	anti-parallel
Strand 3	C	44	50	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	64	first strand
Strand 2	C	69	74	anti-parallel
Strand 3	C	78	84	anti-parallel
Strand 4	C	90	95	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	103	108	first strand
Strand 2	C	115	119	anti-parallel
Strand 3	C	124	130	anti-parallel
Strand 4	C	135	141	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	149	153	first strand
Strand 2	C	161	165	anti-parallel
Strand 3	C	170	173	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	213	first strand
Strand 2	C	220	223	anti-parallel
Strand 3	C	228	232	anti-parallel
Strand 4	C	244	248	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	255	259	first strand
Strand 2	C	264	268	anti-parallel
Strand 3	C	275	280	anti-parallel
Strand 4	C	283	289	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	33	first strand
Strand 2	D	37	42	anti-parallel
Strand 3	D	50	55	anti-parallel
Strand 4	D	89	92	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	157	159	first strand
Strand 2	D	166	172	anti-parallel
Strand 3	D	175	183	anti-parallel
Strand 4	D	238	245	anti-parallel
Strand 5	D	214	218	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	16	17	first strand
Strand 2	E	20	21	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	51	56	first strand
Strand 2	F	59	64	anti-parallel
Strand 3	F	69	75	anti-parallel
Strand 4	F	114	119	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	8	12	first strand
Strand 2	I	16	21	anti-parallel
Strand 3	I	29	32	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	53	54	first strand
Strand 2	I	35	38	anti-parallel
Strand 3	I	65	68	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	71	72	first strand
Strand 2	I	75	76	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	103	104	first strand
Strand 2	I	132	133	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	169	170	first strand
Strand 2	I	160	166	anti-parallel
Strand 3	I	176	178	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	169	170	first strand
Strand 2	I	160	166	anti-parallel
Strand 3	I	150	154	anti-parallel
Strand 4	I	297	300	parallel
Strand 5	I	329	330	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	238	240	first strand
Strand 2	I	248	250	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	9	12	first strand
Strand 2	J	16	20	anti-parallel
Strand 3	J	29	32	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	53	54	first strand
Strand 2	J	35	38	anti-parallel
Strand 3	J	65	68	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	71	72	first strand
Strand 2	J	75	76	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	131	132	first strand
Strand 2	J	357	358	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	169	170	first strand
Strand 2	J	160	166	anti-parallel
Strand 3	J	176	178	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	169	170	first strand
Strand 2	J	160	166	anti-parallel
Strand 3	J	150	155	anti-parallel
Strand 4	J	297	299	parallel
Strand 5	J	329	330	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	238	241	first strand
Strand 2	J	247	250	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	8	11	first strand
Strand 2	K	16	21	anti-parallel
Strand 3	K	29	32	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	53	54	first strand
Strand 2	K	35	38	anti-parallel
Strand 3	K	65	68	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	71	72	first strand
Strand 2	K	75	76	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	105	107	first strand
Strand 2	K	134	136	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	131	132	first strand
Strand 2	K	357	358	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	169	170	first strand
Strand 2	K	160	166	anti-parallel
Strand 3	K	176	178	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	169	170	first strand
Strand 2	K	160	166	anti-parallel
Strand 3	K	150	155	anti-parallel
Strand 4	K	297	300	parallel
Strand 5	K	329	330	parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	238	241	first strand
Strand 2	K	247	250	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	12	first strand
Strand 2	L	17	20	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	53	54	first strand
Strand 2	L	35	38	anti-parallel
Strand 3	L	65	68	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	71	72	first strand
Strand 2	L	75	76	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	103	106	first strand
Strand 2	L	131	135	parallel
Strand 3	L	357	358	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	176	178	first strand
Strand 2	L	160	165	anti-parallel
Strand 3	L	150	155	anti-parallel
Strand 4	L	297	300	parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	238	241	first strand
Strand 2	L	247	250	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6W17

Analysis of interatomic Contacts of Structural Units in PDB entry:
6W17