Analysis of interatomic Contacts of Structural Units in PDB entry:
6W1W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6W1W entry

There are 2 chains in PDB entry 6W1W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLN 354
B
 MSE 1GLN 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6W1W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 33Right-handed alpha
Helix 2
AA2
A
42 64Right-handed alpha
Helix 3
AA3
A
65 88Right-handed alpha
Helix 4
AA4
A
96 149Right-handed alpha
Helix 5
AA5
A
150 152Right-handed 310
Helix 6
AA6
A
153 174Right-handed alpha
Helix 7
AA7
A
179 185Right-handed alpha
Helix 8
AA8
A
223 230Right-handed alpha
Helix 9
AA9
A
231 245Right-handed alpha
Helix 10
AB1
A
249 270Right-handed alpha
Helix 11
AB2
A
271 273Right-handed 310
Helix 12
AB3
A
274 302Right-handed alpha
Helix 13
AB4
A
305 308Right-handed 310
Helix 14
AB5
A
309 314Right-handed alpha
Helix 15
AB6
A
314 333Right-handed alpha
Helix 16
AB7
B
5 33Right-handed alpha
Helix 17
AB8
B
42 59Right-handed alpha
Helix 18
AB9
B
59 64Right-handed alpha
Helix 19
AC1
B
65 87Right-handed alpha
Helix 20
AC2
B
96 149Right-handed alpha
Helix 21
AC3
B
150 152Right-handed 310
Helix 22
AC4
B
153 174Right-handed alpha
Helix 23
AC5
B
179 186Right-handed alpha
Helix 24
AC6
B
223 230Right-handed alpha
Helix 25
AC7
B
231 245Right-handed alpha
Helix 26
AC8
B
249 270Right-handed alpha
Helix 27
AC9
B
271 273Right-handed 310
Helix 28
AD1
B
274 301Right-handed alpha
Helix 29
AD2
B
305 308Right-handed 310
Helix 30
AD3
B
309 314Right-handed alpha
Helix 31
AD4
B
314 333Right-handed alpha
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There are 4 sheets in PDB entry 6W1W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 219first strand
Strand 2
A
190 200anti-parallel
Strand 3
A
337 338parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 219first strand
Strand 2
A
190 200anti-parallel
Strand 3
A
342 345parallel
Strand 4
A
350 353anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 35first strand
Strand 2
B
208 213anti-parallel
Strand 3
B
190 200anti-parallel
Strand 4
B
337 338parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 219first strand
Strand 2
B
190 200anti-parallel
Strand 3
B
342 345parallel
Strand 4
B
350 353anti-parallel
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