Analysis of interatomic Contacts of Structural Units in PDB entry:
6W2Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6W2Y entry

There are 2 chains in PDB entry 6W2Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 49ILE 744
B
 GLU 49ILE 744
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 6W2Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
71 85Right-handed alpha
Helix 2
AA2
A
104 115Right-handed alpha
Helix 3
AA3
A
129 139Right-handed alpha
Helix 4
AA4
A
154 159Right-handed 310
Helix 5
AA5
A
173 175Right-handed 310
Helix 6
AA6
A
176 188Right-handed alpha
Helix 7
AA7
A
201 215Right-handed alpha
Helix 8
AA8
A
230 240Right-handed alpha
Helix 9
AA9
A
250 262Right-handed alpha
Helix 10
AB1
A
294 300Right-handed alpha
Helix 11
AB2
A
325 335Right-handed alpha
Helix 12
AB3
A
349 368Right-handed alpha
Helix 13
AB4
A
387 398Right-handed alpha
Helix 14
AB5
A
473 498Right-handed alpha
Helix 15
AB6
A
502 508Right-handed alpha
Helix 16
AB7
A
509 526Right-handed alpha
Helix 17
AB8
A
541 574Right-handed alpha
Helix 18
AB9
A
592 615Right-handed alpha
Helix 19
AC1
A
648 674Right-handed alpha
Helix 20
AC2
A
687 709Right-handed alpha
Helix 21
AC3
A
710 712Right-handed 310
Helix 22
AC4
A
715 736Right-handed alpha
Helix 23
AC5
A
736 744Right-handed alpha
Helix 24
AC6
B
71 84Right-handed alpha
Helix 25
AC7
B
104 115Right-handed alpha
Helix 26
AC8
B
129 138Right-handed alpha
Helix 27
AC9
B
154 158Right-handed 310
Helix 28
AD1
B
173 175Right-handed 310
Helix 29
AD2
B
176 188Right-handed alpha
Helix 30
AD3
B
201 215Right-handed alpha
Helix 31
AD4
B
231 240Right-handed alpha
Helix 32
AD5
B
250 262Right-handed alpha
Helix 33
AD6
B
294 299Right-handed alpha
Helix 34
AD7
B
325 335Right-handed alpha
Helix 35
AD8
B
349 368Right-handed alpha
Helix 36
AD9
B
387 398Right-handed alpha
Helix 37
AE1
B
473 499Right-handed alpha
Helix 38
AE2
B
502 507Right-handed alpha
Helix 39
AE3
B
509 526Right-handed alpha
Helix 40
AE4
B
527 532Right-handed 310
Helix 41
AE5
B
541 575Right-handed alpha
Helix 42
AE6
B
592 615Right-handed alpha
Helix 43
AE7
B
648 674Right-handed alpha
Helix 44
AE8
B
685 709Right-handed alpha
Helix 45
AE9
B
710 712Right-handed 310
Helix 46
AF1
B
715 744Right-handed alpha
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There are 8 sheets in PDB entry 6W2Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 100first strand
Strand 2
A
51 59parallel
Strand 3
A
122 127parallel
Strand 4
A
146 149parallel
Strand 5
A
166 168parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 225first strand
Strand 2
A
191 196parallel
Strand 3
A
244 248parallel
Strand 4
A
272 276parallel
Strand 5
A
306 310parallel
Strand 6
A
419 425anti-parallel
Strand 7
A
430 437anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 403first strand
Strand 2
A
406 409anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
463 467first strand
Strand 2
A
636 644parallel
Strand 3
A
619 623anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 100first strand
Strand 2
B
51 59parallel
Strand 3
B
122 127parallel
Strand 4
B
146 149parallel
Strand 5
B
166 168parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
219 220first strand
Strand 2
B
191 196parallel
Strand 3
B
244 248parallel
Strand 4
B
272 276parallel
Strand 5
B
305 310parallel
Strand 6
B
419 425anti-parallel
Strand 7
B
430 437anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
402 403first strand
Strand 2
B
406 407anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
463 468first strand
Strand 2
B
636 644parallel
Strand 3
B
619 623anti-parallel
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