Analysis of interatomic Contacts of Structural Units in PDB entry:
6W35


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6W35 entry

There is 1 chain in PDB entry 6W35 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 54GLU 856
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 6W35. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
89 95Right-handed alpha
Helix 2
AA2
A
123 128Right-handed alpha
Helix 3
AA3
A
133 139Right-handed alpha
Helix 4
AA4
A
143 147Right-handed 310
Helix 5
AA5
A
175 185Right-handed 310
Helix 6
AA6
A
186 196Right-handed alpha
Helix 7
AA7
A
209 220Right-handed alpha
Helix 8
AA8
A
222 227Right-handed alpha
Helix 9
AA9
A
247 255Right-handed 310
Helix 10
AB1
A
259 267Right-handed alpha
Helix 11
AB2
A
281 293Right-handed alpha
Helix 12
AB3
A
312 319Right-handed alpha
Helix 13
AB4
A
322 324Right-handed 310
Helix 14
AB5
A
325 346Right-handed alpha
Helix 15
AB6
A
374 376Right-handed 310
Helix 16
AB7
A
404 412Right-handed alpha
Helix 17
AB8
A
427 429Right-handed 310
Helix 18
AB9
A
430 434Right-handed 310
Helix 19
AC1
A
481 485Right-handed 310
Helix 20
AC2
A
508 517Right-handed alpha
Helix 21
AC3
A
531 535Right-handed 310
Helix 22
AC4
A
559 563Right-handed 310
Helix 23
AC5
A
587 593Right-handed alpha
Helix 24
AC6
A
642 646Right-handed 310
Helix 25
AC7
A
656 660Right-handed 310
Helix 26
AC8
A
662 669Right-handed alpha
Helix 27
AC9
A
679 683Right-handed 310
Helix 28
AD1
A
685 693Right-handed alpha
Helix 29
AD2
A
694 696Right-handed 310
Helix 30
AD3
A
702 715Right-handed alpha
Helix 31
AD4
A
715 725Right-handed alpha
Helix 32
AD5
A
745 749Right-handed 310
Helix 33
AD6
A
777 781Right-handed 310
Helix 34
AD7
A
807 810Right-handed 310
Helix 35
AD8
A
811 819Right-handed alpha
Helix 36
AD9
A
822 831Right-handed alpha
Helix 37
AE1
A
841 851Right-handed alpha
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There are 9 sheets in PDB entry 6W35. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 311first strand
Strand 2
A
166 172parallel
Strand 3
A
353 358parallel
Strand 4
A
488 491anti-parallel
Strand 5
A
197 198anti-parallel
Strand 6
A
499 500parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
504 505parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 235first strand
Strand 2
A
240 242anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 364first strand
Strand 2
A
473 474anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 372first strand
Strand 2
A
453 455parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
383 386first strand
Strand 2
A
390 395anti-parallel
Strand 3
A
444 448anti-parallel
Strand 4
A
421 425anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
599 600first strand
Strand 2
A
832 833anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 610first strand
Strand 2
A
615 619anti-parallel
Strand 3
A
625 632anti-parallel
Strand 4
A
727 734anti-parallel
Strand 5
A
763 771anti-parallel
Strand 6
A
785 793anti-parallel
Strand 7
A
820 821anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
673 676first strand
Strand 2
A
698 701anti-parallel
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