Analysis of interatomic Contacts of Structural Units in PDB entry:
6W36


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6W36 entry

There is 1 chain in PDB entry 6W36 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 14GLU 343
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6W36. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 30Right-handed alpha
Helix 2
AA2
A
48 63Right-handed alpha
Helix 3
AA3
A
73 81Right-handed alpha
Helix 4
AA4
A
101 117Right-handed alpha
Helix 5
AA5
A
118 120Right-handed 310
Helix 6
AA6
A
130 138Right-handed alpha
Helix 7
AA7
A
179 182Right-handed 310
Helix 8
AA8
A
188 197Right-handed alpha
Helix 9
AA9
A
218 228Right-handed alpha
Helix 10
AB1
A
242 253Right-handed alpha
Helix 11
AB2
A
259 278Right-handed alpha
Helix 12
AB3
A
280 296Right-handed alpha
Helix 13
AB4
A
299 318Right-handed alpha
Helix 14
AB5
A
319 321Right-handed 310
Helix 15
AB6
A
322 341Right-handed alpha
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There are 3 sheets in PDB entry 6W36. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
211 214anti-parallel
Strand 3
A
184 187anti-parallel
Strand 4
A
66 72anti-parallel
Strand 5
A
90 97anti-parallel
Strand 6
A
164 172parallel
Strand 7
A
151 157anti-parallel
Strand 8
A
139 146anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 35first strand
Strand 2
A
44 47anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 231first strand
Strand 2
A
256 257parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il