Analysis of interatomic Contacts of Structural Units in PDB entry:
6W3A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6W3A entry

There are 2 chains in PDB entry 6W3A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 562GLU 964
B
 SER 562LYS 908
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 6W3A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
602 604Right-handed 310
Helix 2
AA2
A
605 620Right-handed alpha
Helix 3
AA3
A
649 654Right-handed alpha
Helix 4
AA4
A
664 682Right-handed alpha
Helix 5
AA5
A
739 743Right-handed 310
Helix 6
AA6
A
753 769Right-handed alpha
Helix 7
AA7
A
777 779Right-handed 310
Helix 8
AA8
A
780 787Right-handed alpha
Helix 9
AA9
A
799 813Right-handed alpha
Helix 10
AB1
A
816 820Right-handed 310
Helix 11
AB2
A
822 828Right-handed alpha
Helix 12
AB3
A
829 833Right-handed 310
Helix 13
AB4
A
834 849Right-handed alpha
Helix 14
AB5
A
856 864Right-handed alpha
Helix 15
AB6
A
865 870Right-handed alpha
Helix 16
AB7
A
873 877Right-handed 310
Helix 17
AB8
A
880 884Right-handed 310
Helix 18
AB9
A
896 910Right-handed alpha
Helix 19
AC1
A
915 922Right-handed alpha
Helix 20
AC2
A
926 937Right-handed alpha
Helix 21
AC3
A
939 948Right-handed alpha
Helix 22
AC4
A
949 952Right-handed 310
Helix 23
AC5
B
602 604Right-handed 310
Helix 24
AC6
B
605 619Right-handed alpha
Helix 25
AC7
B
649 655Right-handed alpha
Helix 26
AC8
B
664 682Right-handed alpha
Helix 27
AC9
B
739 743Right-handed 310
Helix 28
AD1
B
753 769Right-handed alpha
Helix 29
AD2
B
777 779Right-handed 310
Helix 30
AD3
B
780 787Right-handed alpha
Helix 31
AD4
B
799 813Right-handed alpha
Helix 32
AD5
B
816 820Right-handed 310
Helix 33
AD6
B
822 829Right-handed alpha
Helix 34
AD7
B
830 833Right-handed 310
Helix 35
AD8
B
834 849Right-handed alpha
Helix 36
AD9
B
865 870Right-handed alpha
Helix 37
AE1
B
873 878Right-handed alpha
Helix 38
AE2
B
896 910Right-handed alpha
Helix 39
AE3
B
915 923Right-handed alpha
Helix 40
AE4
B
926 935Right-handed alpha
Helix 41
AE5
B
939 948Right-handed alpha
Helix 42
AE6
B
949 952Right-handed 310
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There are 4 sheets in PDB entry 6W3A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
564 565first strand
Strand 2
A
569 578anti-parallel
Strand 3
A
585 591anti-parallel
Strand 4
A
594 601anti-parallel
Strand 5
A
638 643anti-parallel
Strand 6
A
628 633anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
647 648first strand
Strand 2
A
695 696anti-parallel
Strand 3
A
707 708anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
564 566first strand
Strand 2
B
569 578anti-parallel
Strand 3
B
585 591anti-parallel
Strand 4
B
594 601anti-parallel
Strand 5
B
638 643anti-parallel
Strand 6
B
628 632anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
647 648first strand
Strand 2
B
695 696anti-parallel
Strand 3
B
707 708anti-parallel
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