Analysis of interatomic Contacts of Structural Units in PDB entry:
6W3I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6W3I entry

There are 2 chains in PDB entry 6W3I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 14GLU 343
B
 ARG 585PRO 807
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6W3I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 31Right-handed alpha
Helix 2
AA2
A
48 61Right-handed alpha
Helix 3
AA3
A
73 81Right-handed alpha
Helix 4
AA4
A
101 118Right-handed alpha
Helix 5
AA5
A
123 127Right-handed 310
Helix 6
AA6
A
130 138Right-handed alpha
Helix 7
AA7
A
179 182Right-handed 310
Helix 8
AA8
A
188 195Right-handed alpha
Helix 9
AA9
A
218 229Right-handed alpha
Helix 10
AB1
A
235 239Right-handed 310
Helix 11
AB2
A
240 241Right-handed 310
Helix 12
AB3
A
242 253Right-handed alpha
Helix 13
AB4
A
259 278Right-handed alpha
Helix 14
AB5
A
280 296Right-handed alpha
Helix 15
AB6
A
302 317Right-handed alpha
Helix 16
AB7
A
323 343Right-handed alpha
Helix 17
AB8
B
676 678Right-handed 310
Helix 18
AB9
B
679 681Right-handed 310
Helix 19
AC1
B
682 697Right-handed alpha
Helix 20
AC2
B
754 760Right-handed alpha
Helix 21
AC3
B
762 794Right-handed alpha
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There are 4 sheets in PDB entry 6W3I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
211 214anti-parallel
Strand 3
A
184 187anti-parallel
Strand 4
A
66 72anti-parallel
Strand 5
A
90 97anti-parallel
Strand 6
A
164 172parallel
Strand 7
A
151 157anti-parallel
Strand 8
A
139 146anti-parallel
Strand 9
B
670 674parallel
Strand 10
B
645 649anti-parallel
Strand 11
B
630 639anti-parallel
Strand 12
B
619 627anti-parallel
Strand 13
B
609 613anti-parallel
Strand 14
B
603 605anti-parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
211 214anti-parallel
Strand 3
A
184 187anti-parallel
Strand 4
A
66 72anti-parallel
Strand 5
A
90 97anti-parallel
Strand 6
A
164 172parallel
Strand 7
A
151 157anti-parallel
Strand 8
A
139 146anti-parallel
Strand 9
B
670 674parallel
Strand 10
B
645 649anti-parallel
Strand 11
B
630 639anti-parallel
Strand 12
B
657 658anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 35first strand
Strand 2
A
44 47anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
749 752first strand
Strand 2
B
740 743anti-parallel
Strand 3
B
732 735anti-parallel
Strand 4
B
723 727anti-parallel
Strand 5
B
710 715anti-parallel
Strand 6
B
701 706anti-parallel
Strand 7
B
801 803parallel
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