Analysis of interatomic Contacts of Structural Units in PDB entry:
6W4U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6W4U entry

There are 2 chains in PDB entry 6W4U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0ASN 251
B
 HIS -1ASN 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6W4U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 29Right-handed alpha
Helix 2
AA2
A
42 44Right-handed 310
Helix 3
AA3
A
45 54Right-handed alpha
Helix 4
AA4
A
78 85Right-handed alpha
Helix 5
AA5
A
94 101Right-handed alpha
Helix 6
AA6
A
104 119Right-handed alpha
Helix 7
AA7
A
129 135Right-handed alpha
Helix 8
AA8
A
137 154Right-handed alpha
Helix 9
AA9
A
155 159Right-handed 310
Helix 10
AB1
A
167 172Right-handed alpha
Helix 11
AB2
A
178 195Right-handed alpha
Helix 12
AB3
A
197 204Right-handed alpha
Helix 13
AB4
A
216 222Right-handed alpha
Helix 14
AB5
A
237 251Right-handed alpha
Helix 15
AB6
B
15 28Right-handed alpha
Helix 16
AB7
B
42 54Right-handed alpha
Helix 17
AB8
B
78 85Right-handed alpha
Helix 18
AB9
B
94 101Right-handed alpha
Helix 19
AC1
B
104 119Right-handed alpha
Helix 20
AC2
B
129 135Right-handed alpha
Helix 21
AC3
B
137 154Right-handed alpha
Helix 22
AC4
B
155 159Right-handed 310
Helix 23
AC5
B
167 171Right-handed 310
Helix 24
AC6
B
178 195Right-handed alpha
Helix 25
AC7
B
197 204Right-handed alpha
Helix 26
AC8
B
216 222Right-handed alpha
Helix 27
AC9
B
237 251Right-handed alpha
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There are 2 sheets in PDB entry 6W4U. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 9first strand
Strand 2
A
36 40parallel
Strand 3
A
59 62parallel
Strand 4
A
89 92parallel
Strand 5
A
121 126parallel
Strand 6
A
162 165parallel
Strand 7
A
206 208parallel
Strand 8
A
228 231parallel
Strand 9
A
5 9parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 9first strand
Strand 2
B
35 40parallel
Strand 3
B
59 62parallel
Strand 4
B
89 92parallel
Strand 5
B
121 126parallel
Strand 6
B
162 165parallel
Strand 7
B
206 208parallel
Strand 8
B
228 231parallel
Strand 9
B
4 9parallel
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