Analysis of interatomic Contacts of Structural Units in PDB entry:
6W4X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6W4X entry

There are 6 chains in PDB entry 6W4X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 736
B
 LEU 5GLN 742
C
 ALA 1SER 121
C
 THR 123LEU 375
D
 ALA 1SER 121
D
 THR 123SER 341
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 95 helices in PDB entry 6W4X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 25Right-handed alpha
Helix 2
AA2
A
26 30Right-handed 310
Helix 3
AA3
A
39 45Right-handed alpha
Helix 4
AA4
A
54 62Right-handed alpha
Helix 5
AA5
A
76 95Right-handed alpha
Helix 6
AA6
A
101 113Right-handed alpha
Helix 7
AA7
A
117 123Right-handed alpha
Helix 8
AA8
A
124 133Right-handed alpha
Helix 9
AA9
A
136 142Right-handed 310
Helix 10
AB1
A
144 155Right-handed alpha
Helix 11
AB2
A
168 181Right-handed alpha
Helix 12
AB3
A
188 202Right-handed alpha
Helix 13
AB4
A
208 215Right-handed alpha
Helix 14
AB5
A
233 249Right-handed alpha
Helix 15
AB6
A
258 261Right-handed 310
Helix 16
AB7
A
278 290Right-handed alpha
Helix 17
AB8
A
312 317Right-handed alpha
Helix 18
AB9
A
325 329Right-handed 310
Helix 19
AC1
A
340 349Right-handed alpha
Helix 20
AC2
A
363 371Right-handed alpha
Helix 21
AC3
A
371 385Right-handed alpha
Helix 22
AC4
A
395 410Right-handed alpha
Helix 23
AC5
A
476 496Right-handed alpha
Helix 24
AC6
A
500 511Right-handed alpha
Helix 25
AC7
A
519 527Right-handed alpha
Helix 26
AC8
A
536 563Right-handed alpha
Helix 27
AC9
A
567 571Right-handed 310
Helix 28
AD1
A
578 583Right-handed alpha
Helix 29
AD2
A
584 591Right-handed 310
Helix 30
AD3
A
598 609Right-handed alpha
Helix 31
AD4
A
624 629Right-handed alpha
Helix 32
AD5
A
668 672Right-handed 310
Helix 33
AD6
A
675 687Right-handed alpha
Helix 34
AD7
A
700 704Right-handed 310
Helix 35
AD8
A
710 724Right-handed alpha
Helix 36
AD9
B
19 30Right-handed alpha
Helix 37
AE1
B
37 46Right-handed alpha
Helix 38
AE2
B
54 68Right-handed alpha
Helix 39
AE3
B
76 95Right-handed alpha
Helix 40
AE4
B
101 113Right-handed alpha
Helix 41
AE5
B
117 123Right-handed alpha
Helix 42
AE6
B
124 133Right-handed alpha
Helix 43
AE7
B
136 143Right-handed 310
Helix 44
AE8
B
144 155Right-handed alpha
Helix 45
AE9
B
168 181Right-handed alpha
Helix 46
AF1
B
188 202Right-handed alpha
Helix 47
AF2
B
208 215Right-handed alpha
Helix 48
AF3
B
233 249Right-handed alpha
Helix 49
AF4
B
278 292Right-handed alpha
Helix 50
AF5
B
312 317Right-handed alpha
Helix 51
AF6
B
325 329Right-handed 310
Helix 52
AF7
B
340 349Right-handed alpha
Helix 53
AF8
B
363 371Right-handed alpha
Helix 54
AF9
B
371 385Right-handed alpha
Helix 55
AG1
B
395 410Right-handed alpha
Helix 56
AG2
B
417 423Right-handed alpha
Helix 57
AG3
B
476 496Right-handed alpha
Helix 58
AG4
B
500 511Right-handed alpha
Helix 59
AG5
B
519 527Right-handed alpha
Helix 60
AG6
B
536 563Right-handed alpha
Helix 61
AG7
B
567 571Right-handed 310
Helix 62
AG8
B
578 583Right-handed alpha
Helix 63
AG9
B
584 588Right-handed 310
Helix 64
AH1
B
598 609Right-handed alpha
Helix 65
AH2
B
624 629Right-handed alpha
Helix 66
AH3
B
675 689Right-handed alpha
Helix 67
AH4
B
700 708Right-handed 310
Helix 68
AH5
B
710 724Right-handed alpha
Helix 69
AH6
C
33 46Right-handed alpha
Helix 70
AH7
C
55 65Right-handed alpha
Helix 71
AH8
C
66 96Right-handed alpha
Helix 72
AH9
C
101 127Right-handed alpha
Helix 73
AI1
C
132 143Right-handed alpha
Helix 74
AI2
C
143 170Right-handed alpha
Helix 75
AI3
C
185 206Right-handed alpha
Helix 76
AI4
C
206 221Right-handed alpha
Helix 77
AI5
C
224 255Right-handed alpha
Helix 78
AI6
C
258 291Right-handed alpha
Helix 79
AI7
C
300 319Right-handed alpha
Helix 80
AI8
C
332 334Right-handed 310
Helix 81
AI9
C
335 340Right-handed alpha
Helix 82
AJ1
C
366 372Right-handed alpha
Helix 83
AJ2
D
33 46Right-handed alpha
Helix 84
AJ3
D
55 64Right-handed alpha
Helix 85
AJ4
D
66 96Right-handed alpha
Helix 86
AJ5
D
97 99Right-handed 310
Helix 87
AJ6
D
101 127Right-handed alpha
Helix 88
AJ7
D
132 143Right-handed alpha
Helix 89
AJ8
D
143 170Right-handed alpha
Helix 90
AJ9
D
185 206Right-handed alpha
Helix 91
AK1
D
206 221Right-handed alpha
Helix 92
AK2
D
224 254Right-handed alpha
Helix 93
AK3
D
258 291Right-handed alpha
Helix 94
AK4
D
300 320Right-handed alpha
Helix 95
AK5
D
332 338Right-handed 310
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There are 10 sheets in PDB entry 6W4X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
460 461first strand
Strand 2
A
225 229anti-parallel
Strand 3
A
253 257parallel
Strand 4
A
301 307parallel
Strand 5
A
334 339parallel
Strand 6
A
412 416parallel
Strand 7
A
728 734anti-parallel
Strand 8
A
695 699parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 355first strand
Strand 2
A
391 394anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 466first strand
Strand 2
A
514 516parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 8first strand
Strand 2
B
14 15anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
205 206first strand
Strand 2
B
465 468anti-parallel
Strand 3
B
515 518parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
460 462first strand
Strand 2
B
225 229anti-parallel
Strand 3
B
253 257parallel
Strand 4
B
302 307parallel
Strand 5
B
335 339parallel
Strand 6
B
412 416parallel
Strand 7
B
728 729anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
352 356first strand
Strand 2
B
390 394anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
650 655first strand
Strand 2
B
642 647anti-parallel
Strand 3
C
344 346parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
698 699first strand
Strand 2
B
733 734parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
173 177first strand
Strand 2
C
180 184anti-parallel
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